21 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ect2	Epithelial cell transforming 2. (1013 aa)
	DNTT	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (473 aa)
	lig4	DNA ligase. (908 aa)
	ENSPFOP00000002397	DNA ligase. (924 aa)
	ENSPFOP00000002611	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
	brca1	Uncharacterized protein. (1316 aa)
	xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1. (627 aa)
	ENSPFOP00000005078	BRCA1 associated RING domain 1. (745 aa)
	slf1	SMC5-SMC6 complex localization factor 1. (880 aa)
	poll	Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. (573 aa)
	LOC103132650	Tumor protein p53 binding protein, 1. (1538 aa)
	mcph1	Microcephalin 1. (808 aa)
	rfc1	Replication factor C subunit 1. (1166 aa)
	ENSPFOP00000012111	PAX interacting (with transcription-activation domain) protein 1. (1047 aa)
	ctdp1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1. (1004 aa)
	pes1	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (579 aa)
	nbn	Nibrin. (843 aa)
	dbf4	DBF4 zinc finger. (597 aa)
	polm	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (439 aa)
	topbp1	DNA topoisomerase II binding protein 1. (1515 aa)
	ENSPFOP00000025830	Uncharacterized protein. (2090 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNTT	ENSPFOP00000002397	ENSPFOP00000000104	ENSPFOP00000002397	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	DNA ligase.	0.767
DNTT	ENSPFOP00000002611	ENSPFOP00000000104	ENSPFOP00000002611	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.533
DNTT	brca1	ENSPFOP00000000104	ENSPFOP00000004695	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	Uncharacterized protein.	0.446
DNTT	lig4	ENSPFOP00000000104	ENSPFOP00000000760	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	DNA ligase.	0.897
DNTT	poll	ENSPFOP00000000104	ENSPFOP00000005165	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family.	0.645
DNTT	xrcc1	ENSPFOP00000000104	ENSPFOP00000004820	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.914
ENSPFOP00000002397	DNTT	ENSPFOP00000002397	ENSPFOP00000000104	DNA ligase.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.767
ENSPFOP00000002397	ENSPFOP00000002611	ENSPFOP00000002397	ENSPFOP00000002611	DNA ligase.	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	0.781
ENSPFOP00000002397	ENSPFOP00000012111	ENSPFOP00000002397	ENSPFOP00000012111	DNA ligase.	PAX interacting (with transcription-activation domain) protein 1.	0.453
ENSPFOP00000002397	ENSPFOP00000025830	ENSPFOP00000002397	ENSPFOP00000025830	DNA ligase.	Uncharacterized protein.	0.453
ENSPFOP00000002397	LOC103132650	ENSPFOP00000002397	ENSPFOP00000007910	DNA ligase.	Tumor protein p53 binding protein, 1.	0.612
ENSPFOP00000002397	nbn	ENSPFOP00000002397	ENSPFOP00000016046	DNA ligase.	Nibrin.	0.813
ENSPFOP00000002397	poll	ENSPFOP00000002397	ENSPFOP00000005165	DNA ligase.	Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family.	0.858
ENSPFOP00000002397	polm	ENSPFOP00000002397	ENSPFOP00000018925	DNA ligase.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.767
ENSPFOP00000002397	rfc1	ENSPFOP00000002397	ENSPFOP00000010530	DNA ligase.	Replication factor C subunit 1.	0.770
ENSPFOP00000002397	xrcc1	ENSPFOP00000002397	ENSPFOP00000004820	DNA ligase.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.999
ENSPFOP00000002611	DNTT	ENSPFOP00000002611	ENSPFOP00000000104	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.533
ENSPFOP00000002611	ENSPFOP00000002397	ENSPFOP00000002611	ENSPFOP00000002397	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	DNA ligase.	0.781
ENSPFOP00000002611	ENSPFOP00000005078	ENSPFOP00000002611	ENSPFOP00000005078	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	BRCA1 associated RING domain 1.	0.514
ENSPFOP00000002611	LOC103132650	ENSPFOP00000002611	ENSPFOP00000007910	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.	Tumor protein p53 binding protein, 1.	0.589