(30 nodes) A domain family that is part of the cupin metalloenzyme superfamily. network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103153021	Uncharacterized protein. (1174 aa)
	LOC103147098	Lysine (K)-specific demethylase 6A, like. (1457 aa)
	LOC103130570	Lysine (K)-specific demethylase 4A, genome duplicate a. (1035 aa)
	LOC103139054	Lysine (K)-specific demethylase 5C. (1580 aa)
	LOC103146601	Lysine (K)-specific demethylase 6B, a. (2126 aa)
	LOC103139096	Lysine (K)-specific demethylase 5Bb. (1546 aa)
	kdm6a	Lysine (K)-specific demethylase 6A. (1447 aa)
	kdm3b	Lysine (K)-specific demethylase 3B. (1794 aa)
	jmjd1c	Jumonji domain containing 1Cb. (2835 aa)
	phf2	PHD finger protein 2. (1069 aa)
	jmjd6	Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (403 aa)
	kdm2a	Lysine (K)-specific demethylase 2Ab. (1309 aa)
	phf8	PHD finger protein 8. (1023 aa)
	kdm5a	Lysine (K)-specific demethylase 5A. (1734 aa)
	jmjd7	Jumonji domain containing 7. (312 aa)
	ENSPFOP00000011700	Lysine (K)-specific demethylase 2Aa. (1168 aa)
	tyw5	tRNA-yW synthesizing protein 5. (336 aa)
	ENSPFOP00000011752	Lysine (K)-specific demethylase 8. (464 aa)
	jmjd4	Jumonji domain containing 4. (431 aa)
	hif1an	Hypoxia inducible factor 1 subunit alpha inhibitor. (356 aa)
	jarid2	Jumonji, AT rich interactive domain 2b. (1448 aa)
	kdm5b	Lysine (K)-specific demethylase 5Ba. (1482 aa)
	LOC103137779	Uncharacterized protein. (1582 aa)
	kdm7a	Lysine (K)-specific demethylase 7Ab. (809 aa)
	hspbap1	Hspb associated protein 1. (450 aa)
	LOC103133537	Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase. (553 aa)
	LOC103133914	Lysine (K)-specific demethylase 6B, b. (1594 aa)
	ENSPFOP00000019889	Lysine (K)-specific demethylase 2Bb. (1251 aa)
	LOC103129976	Lysine (K)-specific demethylase 4B. (1227 aa)
	ENSPFOP00000028026	Uncharacterized protein. (673 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000011700	LOC103133914	ENSPFOP00000011700	ENSPFOP00000019268	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 6B, b.	0.693
ENSPFOP00000011700	LOC103139054	ENSPFOP00000011700	ENSPFOP00000002786	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 5C.	0.442
ENSPFOP00000011700	LOC103139096	ENSPFOP00000011700	ENSPFOP00000007131	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 5Bb.	0.442
ENSPFOP00000011700	LOC103146601	ENSPFOP00000011700	ENSPFOP00000003837	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 6B, a.	0.693
ENSPFOP00000011700	LOC103147098	ENSPFOP00000011700	ENSPFOP00000001683	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 6A, like.	0.694
ENSPFOP00000011700	jarid2	ENSPFOP00000011700	ENSPFOP00000014618	Lysine (K)-specific demethylase 2Aa.	Jumonji, AT rich interactive domain 2b.	0.451
ENSPFOP00000011700	jmjd1c	ENSPFOP00000011700	ENSPFOP00000009100	Lysine (K)-specific demethylase 2Aa.	Jumonji domain containing 1Cb.	0.510
ENSPFOP00000011700	kdm3b	ENSPFOP00000011700	ENSPFOP00000008824	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 3B.	0.510
ENSPFOP00000011700	kdm5a	ENSPFOP00000011700	ENSPFOP00000010723	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 5A.	0.442
ENSPFOP00000011700	kdm5b	ENSPFOP00000011700	ENSPFOP00000015417	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 5Ba.	0.442
ENSPFOP00000011700	kdm6a	ENSPFOP00000011700	ENSPFOP00000008526	Lysine (K)-specific demethylase 2Aa.	Lysine (K)-specific demethylase 6A.	0.694
ENSPFOP00000011752	LOC103133537	ENSPFOP00000011752	ENSPFOP00000018729	Lysine (K)-specific demethylase 8.	Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.	0.489
ENSPFOP00000011752	jmjd4	ENSPFOP00000011752	ENSPFOP00000012467	Lysine (K)-specific demethylase 8.	Jumonji domain containing 4.	0.548
ENSPFOP00000011752	jmjd6	ENSPFOP00000011752	ENSPFOP00000009393	Lysine (K)-specific demethylase 8.	Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.	0.556
ENSPFOP00000019889	LOC103133914	ENSPFOP00000019889	ENSPFOP00000019268	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 6B, b.	0.693
ENSPFOP00000019889	LOC103139054	ENSPFOP00000019889	ENSPFOP00000002786	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 5C.	0.442
ENSPFOP00000019889	LOC103139096	ENSPFOP00000019889	ENSPFOP00000007131	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 5Bb.	0.442
ENSPFOP00000019889	LOC103146601	ENSPFOP00000019889	ENSPFOP00000003837	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 6B, a.	0.693
ENSPFOP00000019889	LOC103147098	ENSPFOP00000019889	ENSPFOP00000001683	Lysine (K)-specific demethylase 2Bb.	Lysine (K)-specific demethylase 6A, like.	0.694
ENSPFOP00000019889	jarid2	ENSPFOP00000019889	ENSPFOP00000014618	Lysine (K)-specific demethylase 2Bb.	Jumonji, AT rich interactive domain 2b.	0.442