(21 nodes) Transcription factor TFIID complex network (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106953272	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (818 aa)
	taf13	TATA-box binding protein associated factor 13. (125 aa)
	ENSPLAP00000005771	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (157 aa)
	taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (206 aa)
	tbp	TATA box binding protein. (304 aa)
	taf5	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (782 aa)
	ENSPLAP00000012054	Uncharacterized protein. (229 aa)
	LOC106959575	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
	taf10	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
	taf2	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1217 aa)
	ENSPLAP00000016416	TAF4 domain-containing protein. (283 aa)
	taf5l	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (601 aa)
	LOC106953350	Transcription initiation factor TFIID subunit. (1827 aa)
	taf8	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
	LOC106938866	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (247 aa)
	TAF4	TATA-box binding protein associated factor 4. (856 aa)
	taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (368 aa)
	ENSPLAP00000024302	Uncharacterized protein. (284 aa)
	LOC106959106	Transcription initiation factor TFIID subunit 4-like. (921 aa)
	LOC106939932	Transcription initiation factor TFIID subunit 6-like. (637 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (941 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000005771	ENSPLAP00000012054	ENSPLAP00000005771	ENSPLAP00000012054	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.974
ENSPLAP00000005771	ENSPLAP00000016416	ENSPLAP00000005771	ENSPLAP00000016416	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4 domain-containing protein.	0.961
ENSPLAP00000005771	ENSPLAP00000024302	ENSPLAP00000005771	ENSPLAP00000024302	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.974
ENSPLAP00000005771	LOC106938866	ENSPLAP00000005771	ENSPLAP00000021256	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPLAP00000005771	LOC106939932	ENSPLAP00000005771	ENSPLAP00000025524	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit 6-like.	0.991
ENSPLAP00000005771	LOC106953272	ENSPLAP00000005771	ENSPLAP00000001419	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.961
ENSPLAP00000005771	LOC106953350	ENSPLAP00000005771	ENSPLAP00000017972	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit.	0.999
ENSPLAP00000005771	LOC106959106	ENSPLAP00000005771	ENSPLAP00000024347	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit 4-like.	0.961
ENSPLAP00000005771	LOC106959575	ENSPLAP00000005771	ENSPLAP00000012633	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.991
ENSPLAP00000005771	TAF4	ENSPLAP00000005771	ENSPLAP00000021753	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA-box binding protein associated factor 4.	0.961
ENSPLAP00000005771	taf10	ENSPLAP00000005771	ENSPLAP00000013993	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPLAP00000005771	taf11	ENSPLAP00000005771	ENSPLAP00000007018	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPLAP00000005771	taf13	ENSPLAP00000005771	ENSPLAP00000005202	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA-box binding protein associated factor 13.	0.999
ENSPLAP00000005771	taf2	ENSPLAP00000005771	ENSPLAP00000014953	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPLAP00000005771	taf3	ENSPLAP00000005771	ENSPLAP00000030468	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.999
ENSPLAP00000005771	taf5	ENSPLAP00000005771	ENSPLAP00000011436	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.988
ENSPLAP00000005771	taf5l	ENSPLAP00000005771	ENSPLAP00000016586	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.992
ENSPLAP00000005771	taf7	ENSPLAP00000005771	ENSPLAP00000023894	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPLAP00000005771	taf8	ENSPLAP00000005771	ENSPLAP00000018720	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.997
ENSPLAP00000005771	tbp	ENSPLAP00000005771	ENSPLAP00000011405	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA box binding protein.	0.974