7 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106939673	Uncharacterized protein. (413 aa)
	lats2	Large tumor suppressor kinase 2. (1140 aa)
	yap1	Yes-associated protein 1. (433 aa)
	sav1	Salvador family WW domain containing protein 1. (396 aa)
	LOC106963594	MOB kinase activator 1Bb. (217 aa)
	lats1	Large tumor suppressor kinase 1. (1042 aa)
	LOC106961886	MOB kinase activator 1A. (219 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106939673	LOC106961886	ENSPLAP00000000947	ENSPLAP00000023109	Uncharacterized protein.	MOB kinase activator 1A.	0.962
LOC106939673	LOC106963594	ENSPLAP00000000947	ENSPLAP00000014902	Uncharacterized protein.	MOB kinase activator 1Bb.	0.787
LOC106939673	lats1	ENSPLAP00000000947	ENSPLAP00000020830	Uncharacterized protein.	Large tumor suppressor kinase 1.	0.890
LOC106939673	lats2	ENSPLAP00000000947	ENSPLAP00000004629	Uncharacterized protein.	Large tumor suppressor kinase 2.	0.890
LOC106939673	sav1	ENSPLAP00000000947	ENSPLAP00000011134	Uncharacterized protein.	Salvador family WW domain containing protein 1.	0.972
LOC106939673	yap1	ENSPLAP00000000947	ENSPLAP00000008955	Uncharacterized protein.	Yes-associated protein 1.	0.919
LOC106961886	LOC106939673	ENSPLAP00000023109	ENSPLAP00000000947	MOB kinase activator 1A.	Uncharacterized protein.	0.962
LOC106961886	LOC106963594	ENSPLAP00000023109	ENSPLAP00000014902	MOB kinase activator 1A.	MOB kinase activator 1Bb.	0.943
LOC106961886	lats1	ENSPLAP00000023109	ENSPLAP00000020830	MOB kinase activator 1A.	Large tumor suppressor kinase 1.	0.981
LOC106961886	lats2	ENSPLAP00000023109	ENSPLAP00000004629	MOB kinase activator 1A.	Large tumor suppressor kinase 2.	0.981
LOC106961886	sav1	ENSPLAP00000023109	ENSPLAP00000011134	MOB kinase activator 1A.	Salvador family WW domain containing protein 1.	0.881
LOC106961886	yap1	ENSPLAP00000023109	ENSPLAP00000008955	MOB kinase activator 1A.	Yes-associated protein 1.	0.854
LOC106963594	LOC106939673	ENSPLAP00000014902	ENSPLAP00000000947	MOB kinase activator 1Bb.	Uncharacterized protein.	0.787
LOC106963594	LOC106961886	ENSPLAP00000014902	ENSPLAP00000023109	MOB kinase activator 1Bb.	MOB kinase activator 1A.	0.943
LOC106963594	lats1	ENSPLAP00000014902	ENSPLAP00000020830	MOB kinase activator 1Bb.	Large tumor suppressor kinase 1.	0.970
LOC106963594	lats2	ENSPLAP00000014902	ENSPLAP00000004629	MOB kinase activator 1Bb.	Large tumor suppressor kinase 2.	0.970
LOC106963594	sav1	ENSPLAP00000014902	ENSPLAP00000011134	MOB kinase activator 1Bb.	Salvador family WW domain containing protein 1.	0.849
LOC106963594	yap1	ENSPLAP00000014902	ENSPLAP00000008955	MOB kinase activator 1Bb.	Yes-associated protein 1.	0.780
lats1	LOC106939673	ENSPLAP00000020830	ENSPLAP00000000947	Large tumor suppressor kinase 1.	Uncharacterized protein.	0.890
lats1	LOC106961886	ENSPLAP00000020830	ENSPLAP00000023109	Large tumor suppressor kinase 1.	MOB kinase activator 1A.	0.981