40 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (149 aa)
	rpl34	Ribosomal protein L34. (117 aa)
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	rpl11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
	LOC106940296	Uncharacterized protein. (134 aa)
	LOC106955741	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	rps12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (156 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (172 aa)
	rpl23	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	rpl32	Ribosomal protein L32. (135 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	rpl13a	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
	LOC106953469	Ribosomal protein L26. (145 aa)
	rpl37a	Ribosomal protein L37a. (92 aa)
	RPL7A	Ribosomal protein L7a. (266 aa)
	rpl9	Ribosomal protein L9. (192 aa)
	rpl28	Ribosomal protein L28. (137 aa)
	LOC106949972	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (132 aa)
	rps3	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	ENSPLAP00000023604	Ribosomal protein S28. (60 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	rpl4	Ribosomal protein L4. (368 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	rpl35a	Ribosomal protein L35a. (110 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	rpl8	Ribosomal protein L8. (280 aa)
	RPS20	Ribosomal protein S20. (119 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (184 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000023604	LOC106940296	ENSPLAP00000023604	ENSPLAP00000003204	Ribosomal protein S28.	Uncharacterized protein.	0.999
ENSPLAP00000023604	LOC106949972	ENSPLAP00000023604	ENSPLAP00000020839	Ribosomal protein S28.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
ENSPLAP00000023604	LOC106953469	ENSPLAP00000023604	ENSPLAP00000013727	Ribosomal protein S28.	Ribosomal protein L26.	0.999
ENSPLAP00000023604	LOC106955741	ENSPLAP00000023604	ENSPLAP00000004432	Ribosomal protein S28.	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999
ENSPLAP00000023604	RPL27A	ENSPLAP00000023604	ENSPLAP00000008831	Ribosomal protein S28.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.999
ENSPLAP00000023604	RPL7A	ENSPLAP00000023604	ENSPLAP00000017521	Ribosomal protein S28.	Ribosomal protein L7a.	0.999
ENSPLAP00000023604	RPS20	ENSPLAP00000023604	ENSPLAP00000031006	Ribosomal protein S28.	Ribosomal protein S20.	0.999
ENSPLAP00000023604	rpl10	ENSPLAP00000023604	ENSPLAP00000028378	Ribosomal protein S28.	Ribosomal protein L10.	0.999
ENSPLAP00000023604	rpl11	ENSPLAP00000023604	ENSPLAP00000002940	Ribosomal protein S28.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
ENSPLAP00000023604	rpl12	ENSPLAP00000023604	ENSPLAP00000004688	Ribosomal protein S28.	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	0.999
ENSPLAP00000023604	rpl13a	ENSPLAP00000023604	ENSPLAP00000012701	Ribosomal protein S28.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
ENSPLAP00000023604	rpl15	ENSPLAP00000023604	ENSPLAP00000004469	Ribosomal protein S28.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
ENSPLAP00000023604	rpl17	ENSPLAP00000023604	ENSPLAP00000031609	Ribosomal protein S28.	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.	0.999
ENSPLAP00000023604	rpl18a	ENSPLAP00000023604	ENSPLAP00000028373	Ribosomal protein S28.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
ENSPLAP00000023604	rpl23	ENSPLAP00000023604	ENSPLAP00000009748	Ribosomal protein S28.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
ENSPLAP00000023604	rpl27	ENSPLAP00000023604	ENSPLAP00000011120	Ribosomal protein S28.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
ENSPLAP00000023604	rpl28	ENSPLAP00000023604	ENSPLAP00000020352	Ribosomal protein S28.	Ribosomal protein L28.	0.999
ENSPLAP00000023604	rpl29	ENSPLAP00000023604	ENSPLAP00000025206	Ribosomal protein S28.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
ENSPLAP00000023604	rpl32	ENSPLAP00000023604	ENSPLAP00000010864	Ribosomal protein S28.	Ribosomal protein L32.	0.999
ENSPLAP00000023604	rpl34	ENSPLAP00000023604	ENSPLAP00000001819	Ribosomal protein S28.	Ribosomal protein L34.	0.999