5 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	prkacb	Uncharacterized protein. (300 aa)
	ppp2r3a	Protein phosphatase 2, regulatory subunit B'', alpha. (1402 aa)
	LOC106934571	Ryanodine receptor 2b (cardiac). (4761 aa)
	ENSPLAP00000009410	Ins145_P3_rec domain-containing protein. (136 aa)
	LOC106960988	Uncharacterized protein. (3750 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000009410	LOC106934571	ENSPLAP00000009410	ENSPLAP00000007519	Ins145_P3_rec domain-containing protein.	Ryanodine receptor 2b (cardiac).	0.853
ENSPLAP00000009410	LOC106960988	ENSPLAP00000009410	ENSPLAP00000025088	Ins145_P3_rec domain-containing protein.	Uncharacterized protein.	0.629
ENSPLAP00000009410	ppp2r3a	ENSPLAP00000009410	ENSPLAP00000006626	Ins145_P3_rec domain-containing protein.	Protein phosphatase 2, regulatory subunit B'', alpha.	0.897
ENSPLAP00000009410	prkacb	ENSPLAP00000009410	ENSPLAP00000005677	Ins145_P3_rec domain-containing protein.	Uncharacterized protein.	0.915
LOC106934571	ENSPLAP00000009410	ENSPLAP00000007519	ENSPLAP00000009410	Ryanodine receptor 2b (cardiac).	Ins145_P3_rec domain-containing protein.	0.853
LOC106934571	LOC106960988	ENSPLAP00000007519	ENSPLAP00000025088	Ryanodine receptor 2b (cardiac).	Uncharacterized protein.	0.893
LOC106934571	ppp2r3a	ENSPLAP00000007519	ENSPLAP00000006626	Ryanodine receptor 2b (cardiac).	Protein phosphatase 2, regulatory subunit B'', alpha.	0.890
LOC106934571	prkacb	ENSPLAP00000007519	ENSPLAP00000005677	Ryanodine receptor 2b (cardiac).	Uncharacterized protein.	0.934
LOC106960988	ENSPLAP00000009410	ENSPLAP00000025088	ENSPLAP00000009410	Uncharacterized protein.	Ins145_P3_rec domain-containing protein.	0.629
LOC106960988	LOC106934571	ENSPLAP00000025088	ENSPLAP00000007519	Uncharacterized protein.	Ryanodine receptor 2b (cardiac).	0.893
LOC106960988	ppp2r3a	ENSPLAP00000025088	ENSPLAP00000006626	Uncharacterized protein.	Protein phosphatase 2, regulatory subunit B'', alpha.	0.897
LOC106960988	prkacb	ENSPLAP00000025088	ENSPLAP00000005677	Uncharacterized protein.	Uncharacterized protein.	0.915
ppp2r3a	ENSPLAP00000009410	ENSPLAP00000006626	ENSPLAP00000009410	Protein phosphatase 2, regulatory subunit B'', alpha.	Ins145_P3_rec domain-containing protein.	0.897
ppp2r3a	LOC106934571	ENSPLAP00000006626	ENSPLAP00000007519	Protein phosphatase 2, regulatory subunit B'', alpha.	Ryanodine receptor 2b (cardiac).	0.890
ppp2r3a	LOC106960988	ENSPLAP00000006626	ENSPLAP00000025088	Protein phosphatase 2, regulatory subunit B'', alpha.	Uncharacterized protein.	0.897
prkacb	ENSPLAP00000009410	ENSPLAP00000005677	ENSPLAP00000009410	Uncharacterized protein.	Ins145_P3_rec domain-containing protein.	0.915
prkacb	LOC106934571	ENSPLAP00000005677	ENSPLAP00000007519	Uncharacterized protein.	Ryanodine receptor 2b (cardiac).	0.934
prkacb	LOC106960988	ENSPLAP00000005677	ENSPLAP00000025088	Uncharacterized protein.	Uncharacterized protein.	0.915