8 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mgat5b	Uncharacterized protein. (752 aa)
	LOC106952195	Uncharacterized protein. (541 aa)
	mgat4a	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A. (533 aa)
	MGAT4C	MGAT4 family member C. (487 aa)
	LOC106936559	Uncharacterized protein. (587 aa)
	mgat4c	Mgat4 family member C. (477 aa)
	mgat4b	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B. (464 aa)
	mgat5	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. (741 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106936559	LOC106952195	ENSPLAP00000023858	ENSPLAP00000010452	Uncharacterized protein.	Uncharacterized protein.	0.882
LOC106936559	MGAT4C	ENSPLAP00000023858	ENSPLAP00000022160	Uncharacterized protein.	MGAT4 family member C.	0.935
LOC106936559	mgat4a	ENSPLAP00000023858	ENSPLAP00000017094	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.	0.910
LOC106936559	mgat4b	ENSPLAP00000023858	ENSPLAP00000027877	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.	0.910
LOC106936559	mgat4c	ENSPLAP00000023858	ENSPLAP00000027194	Uncharacterized protein.	Mgat4 family member C.	0.935
LOC106936559	mgat5	ENSPLAP00000023858	ENSPLAP00000028486	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.	0.889
LOC106936559	mgat5b	ENSPLAP00000023858	ENSPLAP00000006059	Uncharacterized protein.	Uncharacterized protein.	0.889
LOC106952195	LOC106936559	ENSPLAP00000010452	ENSPLAP00000023858	Uncharacterized protein.	Uncharacterized protein.	0.882
LOC106952195	MGAT4C	ENSPLAP00000010452	ENSPLAP00000022160	Uncharacterized protein.	MGAT4 family member C.	0.911
LOC106952195	mgat4a	ENSPLAP00000010452	ENSPLAP00000017094	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.	0.911
LOC106952195	mgat4b	ENSPLAP00000010452	ENSPLAP00000027877	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.	0.911
LOC106952195	mgat4c	ENSPLAP00000010452	ENSPLAP00000027194	Uncharacterized protein.	Mgat4 family member C.	0.914
LOC106952195	mgat5	ENSPLAP00000010452	ENSPLAP00000028486	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.	0.886
LOC106952195	mgat5b	ENSPLAP00000010452	ENSPLAP00000006059	Uncharacterized protein.	Uncharacterized protein.	0.894
MGAT4C	LOC106936559	ENSPLAP00000022160	ENSPLAP00000023858	MGAT4 family member C.	Uncharacterized protein.	0.935
MGAT4C	LOC106952195	ENSPLAP00000022160	ENSPLAP00000010452	MGAT4 family member C.	Uncharacterized protein.	0.911
MGAT4C	mgat4c	ENSPLAP00000022160	ENSPLAP00000027194	MGAT4 family member C.	Mgat4 family member C.	0.954
MGAT4C	mgat5	ENSPLAP00000022160	ENSPLAP00000028486	MGAT4 family member C.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.	0.971
MGAT4C	mgat5b	ENSPLAP00000022160	ENSPLAP00000006059	MGAT4 family member C.	Uncharacterized protein.	0.935
mgat4a	LOC106936559	ENSPLAP00000017094	ENSPLAP00000023858	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.	Uncharacterized protein.	0.910