5 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106963330	Notch receptor 1a. (2447 aa)
	ENSPLAP00000002808	MamL-1 domain-containing protein. (132 aa)
	maml3	Mastermind-like transcriptional coactivator 3. (1159 aa)
	LOC106952699	Recombination signal binding protein for immunoglobulin kappa J region a. (488 aa)
	maml2	Uncharacterized protein. (756 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002808	LOC106952699	ENSPLAP00000002808	ENSPLAP00000016677	MamL-1 domain-containing protein.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.950
ENSPLAP00000002808	LOC106963330	ENSPLAP00000002808	ENSPLAP00000001986	MamL-1 domain-containing protein.	Notch receptor 1a.	0.797
ENSPLAP00000002808	maml2	ENSPLAP00000002808	ENSPLAP00000024978	MamL-1 domain-containing protein.	Uncharacterized protein.	0.896
ENSPLAP00000002808	maml3	ENSPLAP00000002808	ENSPLAP00000012738	MamL-1 domain-containing protein.	Mastermind-like transcriptional coactivator 3.	0.909
LOC106952699	ENSPLAP00000002808	ENSPLAP00000016677	ENSPLAP00000002808	Recombination signal binding protein for immunoglobulin kappa J region a.	MamL-1 domain-containing protein.	0.950
LOC106952699	LOC106963330	ENSPLAP00000016677	ENSPLAP00000001986	Recombination signal binding protein for immunoglobulin kappa J region a.	Notch receptor 1a.	0.995
LOC106952699	maml2	ENSPLAP00000016677	ENSPLAP00000024978	Recombination signal binding protein for immunoglobulin kappa J region a.	Uncharacterized protein.	0.950
LOC106952699	maml3	ENSPLAP00000016677	ENSPLAP00000012738	Recombination signal binding protein for immunoglobulin kappa J region a.	Mastermind-like transcriptional coactivator 3.	0.963
LOC106963330	ENSPLAP00000002808	ENSPLAP00000001986	ENSPLAP00000002808	Notch receptor 1a.	MamL-1 domain-containing protein.	0.797
LOC106963330	LOC106952699	ENSPLAP00000001986	ENSPLAP00000016677	Notch receptor 1a.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.995
LOC106963330	maml2	ENSPLAP00000001986	ENSPLAP00000024978	Notch receptor 1a.	Uncharacterized protein.	0.797
LOC106963330	maml3	ENSPLAP00000001986	ENSPLAP00000012738	Notch receptor 1a.	Mastermind-like transcriptional coactivator 3.	0.869
maml2	ENSPLAP00000002808	ENSPLAP00000024978	ENSPLAP00000002808	Uncharacterized protein.	MamL-1 domain-containing protein.	0.896
maml2	LOC106952699	ENSPLAP00000024978	ENSPLAP00000016677	Uncharacterized protein.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.950
maml2	LOC106963330	ENSPLAP00000024978	ENSPLAP00000001986	Uncharacterized protein.	Notch receptor 1a.	0.797
maml2	maml3	ENSPLAP00000024978	ENSPLAP00000012738	Uncharacterized protein.	Mastermind-like transcriptional coactivator 3.	0.909
maml3	ENSPLAP00000002808	ENSPLAP00000012738	ENSPLAP00000002808	Mastermind-like transcriptional coactivator 3.	MamL-1 domain-containing protein.	0.909
maml3	LOC106952699	ENSPLAP00000012738	ENSPLAP00000016677	Mastermind-like transcriptional coactivator 3.	Recombination signal binding protein for immunoglobulin kappa J region a.	0.963
maml3	LOC106963330	ENSPLAP00000012738	ENSPLAP00000001986	Mastermind-like transcriptional coactivator 3.	Notch receptor 1a.	0.869
maml3	maml2	ENSPLAP00000012738	ENSPLAP00000024978	Mastermind-like transcriptional coactivator 3.	Uncharacterized protein.	0.909