8 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106947909	Un-named hu7910. (679 aa)
	LOC106947247	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (424 aa)
	LOC106935502	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (444 aa)
	asph	Asp-B-Hydro_N domain-containing protein. (262 aa)
	ENSPLAP00000021962	Uncharacterized protein. (1031 aa)
	casq1	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (469 aa)
	ENSPLAP00000023040	Uncharacterized protein. (1021 aa)
	LOC106941581	Calsequestrin-1-like. (493 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000021962	LOC106935502	ENSPLAP00000021962	ENSPLAP00000012642	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.891
ENSPLAP00000021962	LOC106941581	ENSPLAP00000021962	ENSPLAP00000028182	Uncharacterized protein.	Calsequestrin-1-like.	0.736
ENSPLAP00000021962	LOC106947247	ENSPLAP00000021962	ENSPLAP00000006009	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.844
ENSPLAP00000021962	LOC106947909	ENSPLAP00000021962	ENSPLAP00000003452	Uncharacterized protein.	Un-named hu7910.	0.885
ENSPLAP00000021962	asph	ENSPLAP00000021962	ENSPLAP00000013259	Uncharacterized protein.	Asp-B-Hydro_N domain-containing protein.	0.650
ENSPLAP00000021962	casq1	ENSPLAP00000021962	ENSPLAP00000022283	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.861
ENSPLAP00000023040	LOC106935502	ENSPLAP00000023040	ENSPLAP00000012642	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.917
ENSPLAP00000023040	LOC106941581	ENSPLAP00000023040	ENSPLAP00000028182	Uncharacterized protein.	Calsequestrin-1-like.	0.870
ENSPLAP00000023040	LOC106947247	ENSPLAP00000023040	ENSPLAP00000006009	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.689
ENSPLAP00000023040	LOC106947909	ENSPLAP00000023040	ENSPLAP00000003452	Uncharacterized protein.	Un-named hu7910.	0.920
ENSPLAP00000023040	asph	ENSPLAP00000023040	ENSPLAP00000013259	Uncharacterized protein.	Asp-B-Hydro_N domain-containing protein.	0.836
ENSPLAP00000023040	casq1	ENSPLAP00000023040	ENSPLAP00000022283	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.847
LOC106935502	ENSPLAP00000021962	ENSPLAP00000012642	ENSPLAP00000021962	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Uncharacterized protein.	0.891
LOC106935502	ENSPLAP00000023040	ENSPLAP00000012642	ENSPLAP00000023040	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Uncharacterized protein.	0.917
LOC106935502	LOC106941581	ENSPLAP00000012642	ENSPLAP00000028182	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Calsequestrin-1-like.	0.850
LOC106935502	LOC106947247	ENSPLAP00000012642	ENSPLAP00000006009	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.909
LOC106935502	LOC106947909	ENSPLAP00000012642	ENSPLAP00000003452	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Un-named hu7910.	0.939
LOC106935502	asph	ENSPLAP00000012642	ENSPLAP00000013259	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Asp-B-Hydro_N domain-containing protein.	0.932
LOC106935502	casq1	ENSPLAP00000012642	ENSPLAP00000022283	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.651
LOC106941581	ENSPLAP00000021962	ENSPLAP00000028182	ENSPLAP00000021962	Calsequestrin-1-like.	Uncharacterized protein.	0.736