STRINGSTRING
lsm2 lsm2 prpf19 prpf19 prpf31 prpf31 prpf8 prpf8 prpf3 prpf3 prpf6 prpf6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
prpf8Pre-mRNA processing factor 8. (2323 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (691 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.