STRINGSTRING
nrarp nrarp xbp1 xbp1 nf1 nf1 ENSPLAP00000005760 ENSPLAP00000005760 lmo2 lmo2 LOC106949598 LOC106949598 scarb1 scarb1 LOC106960188 LOC106960188 LOC106959966 LOC106959966 prok1 prok1 LOC106939472 LOC106939472 vstm4 vstm4 cav1 cav1 bmpr2 bmpr2 fgf7 fgf7 ENSPLAP00000029519 ENSPLAP00000029519 itgb1bp1 itgb1bp1 bmper bmper
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nrarpNOTCH regulated ankyrin repeat protein a. (112 aa)
xbp1X-box binding protein 1. (384 aa)
nf1Neurofibromin 1b. (2795 aa)
ENSPLAP00000005760Lysyl oxidase-like 4. (265 aa)
lmo2LIM domain only 2 (rhombotin-like 1). (160 aa)
LOC106949598Angiomotin like 2a. (676 aa)
scarb1Scavenger receptor class B, member 1; Belongs to the CD36 family. (431 aa)
LOC106960188Angiomotin like 2b. (698 aa)
LOC106959966Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1053 aa)
prok1Prokineticin 1. (102 aa)
LOC106939472Si:cabz01100188.1. (912 aa)
vstm4V-set and transmembrane domain containing 4b. (339 aa)
cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1041 aa)
fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (200 aa)
ENSPLAP00000029519Ig-like domain-containing protein. (152 aa)
itgb1bp1Integrin beta 1 binding protein 1. (198 aa)
bmperBMP binding endothelial regulator. (658 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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