10 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
	LOC106959966	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1053 aa)
	ENSPLAP00000004009	Nuclear receptor binding SET domain protein 2. (487 aa)
	ENSPLAP00000004039	PWWP domain-containing protein. (171 aa)
	LOC106949849	Mesoderm posterior ba. (249 aa)
	wnt2b	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (384 aa)
	nkx2-5	NK2 homeobox 5. (318 aa)
	LOC106946636	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (345 aa)
	ccn1	Cellular communication network factor 1. (380 aa)
	bmpr2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1041 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000004009	nkx2-5	ENSPLAP00000004009	ENSPLAP00000013697	Nuclear receptor binding SET domain protein 2.	NK2 homeobox 5.	0.573
ENSPLAP00000004039	nkx2-5	ENSPLAP00000004039	ENSPLAP00000013697	PWWP domain-containing protein.	NK2 homeobox 5.	0.573
LOC106946636	smo	ENSPLAP00000019729	ENSPLAP00000030768	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.570
LOC106949849	nkx2-5	ENSPLAP00000005356	ENSPLAP00000013697	Mesoderm posterior ba.	NK2 homeobox 5.	0.471
LOC106959966	bmpr2	ENSPLAP00000019635	ENSPLAP00000027360	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.850
bmpr2	LOC106959966	ENSPLAP00000027360	ENSPLAP00000019635	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.850
nkx2-5	ENSPLAP00000004009	ENSPLAP00000013697	ENSPLAP00000004009	NK2 homeobox 5.	Nuclear receptor binding SET domain protein 2.	0.573
nkx2-5	ENSPLAP00000004039	ENSPLAP00000013697	ENSPLAP00000004039	NK2 homeobox 5.	PWWP domain-containing protein.	0.573
nkx2-5	LOC106949849	ENSPLAP00000013697	ENSPLAP00000005356	NK2 homeobox 5.	Mesoderm posterior ba.	0.471
smo	LOC106946636	ENSPLAP00000030768	ENSPLAP00000019729	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.570
smo	wnt2b	ENSPLAP00000030768	ENSPLAP00000009635	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.570
wnt2b	smo	ENSPLAP00000009635	ENSPLAP00000030768	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.570