53 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ncf1	Neutrophil cytosolic factor 1. (419 aa)
	hgfac	HGF activator. (598 aa)
	LOC106958417	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (458 aa)
	sppl3	Signal peptide peptidase 3. (382 aa)
	fkrp	Fukutin related protein. (529 aa)
	srprb	SRP receptor subunit beta. (258 aa)
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
	LOC106953710	Si:dkey-12h9.6. (619 aa)
	LOC106946629	BAI1-associated protein 2a. (557 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (149 aa)
	LOC106946517	SUN domain-containing protein. (1273 aa)
	LOC106946511	Olfactomedin-like domain-containing protein. (456 aa)
	plod3	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. (732 aa)
	LOC106949946	Lecithin retinol acyltransferase b, tandem duplicate 1. (241 aa)
	hcrt	Hypocretin (orexin) neuropeptide precursor. (143 aa)
	LOC106945789	J domain-containing protein. (216 aa)
	ENSPLAP00000005098	Zgc:153704; Belongs to the calycin superfamily. Lipocalin family. (177 aa)
	srpra	SRP receptor subunit alpha. (650 aa)
	rpl18	Ribosomal protein L18. (188 aa)
	ogfod2	2-oxoglutarate and iron-dependent oxygenase domain containing 2. (350 aa)
	ccdc47	Coiled-coil domain containing 47. (489 aa)
	LOC106954997	BAI1 associated protein 2. (533 aa)
	ckap4	Uncharacterized protein. (498 aa)
	ENSPLAP00000007544	Transmembrane protein 97. (140 aa)
	pcsk1	Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. (776 aa)
	LOC106963776	Purinergic receptor P2X, ligand-gated ion channel, 3b. (169 aa)
	hm13	Histocompatibility (minor) 13. (370 aa)
	plod2	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. (709 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	suco	SUN domain containing ossification factor. (1383 aa)
	LOC106951552	Si:dkey-206d17.12. (404 aa)
	ENSPLAP00000013339	C2 domain-containing protein. (94 aa)
	rpl6	Ribosomal protein L6. (271 aa)
	plod1	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. (732 aa)
	pi4kb	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family. (957 aa)
	LOC106958414	Plug_translocon domain-containing protein. (476 aa)
	ENSPLAP00000019579	C-type lectin domain-containing protein. (155 aa)
	LOC106953257	Plug_translocon domain-containing protein. (476 aa)
	LOC106941236	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (841 aa)
	maco1	Macoilin 1b. (679 aa)
	p2rx3	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (393 aa)
	lrpap1	Low density lipoprotein receptor-related protein associated protein 1. (347 aa)
	ENSPLAP00000023604	Ribosomal protein S28. (60 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	epm2a	EPM2A glucan phosphatase, laforin. (316 aa)
	RPS29	Ribosomal protein S29. (71 aa)
	ENSPLAP00000026000	Ribosomal_L18e/L15P domain-containing protein. (128 aa)
	myoc	Myocilin. (479 aa)
	ENSPLAP00000027452	Uncharacterized protein. (53 aa)
	LOC106946125	Macoilin 1a. (672 aa)
	LOC106948861	Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
	LOC106948821	CCHC-type domain-containing protein. (202 aa)
	zc3h12a	Zinc finger CCCH-type containing 12A. (627 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000005098	hgfac	ENSPLAP00000005098	ENSPLAP00000000186	Zgc:153704; Belongs to the calycin superfamily. Lipocalin family.	HGF activator.	0.522
ENSPLAP00000007544	hgfac	ENSPLAP00000007544	ENSPLAP00000000186	Transmembrane protein 97.	HGF activator.	0.437
ENSPLAP00000013339	LOC106941236	ENSPLAP00000013339	ENSPLAP00000021948	C2 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.498
ENSPLAP00000013339	pi4kb	ENSPLAP00000013339	ENSPLAP00000016124	C2 domain-containing protein.	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	0.498
ENSPLAP00000019579	ckap4	ENSPLAP00000019579	ENSPLAP00000007534	C-type lectin domain-containing protein.	Uncharacterized protein.	0.532
ENSPLAP00000019579	hgfac	ENSPLAP00000019579	ENSPLAP00000000186	C-type lectin domain-containing protein.	HGF activator.	0.584
ENSPLAP00000023604	ENSPLAP00000026000	ENSPLAP00000023604	ENSPLAP00000026000	Ribosomal protein S28.	Ribosomal_L18e/L15P domain-containing protein.	0.996
ENSPLAP00000023604	ENSPLAP00000027452	ENSPLAP00000023604	ENSPLAP00000027452	Ribosomal protein S28.	Uncharacterized protein.	0.998
ENSPLAP00000023604	LOC106953257	ENSPLAP00000023604	ENSPLAP00000020068	Ribosomal protein S28.	Plug_translocon domain-containing protein.	0.644
ENSPLAP00000023604	LOC106958414	ENSPLAP00000023604	ENSPLAP00000019167	Ribosomal protein S28.	Plug_translocon domain-containing protein.	0.644
ENSPLAP00000023604	LOC106958417	ENSPLAP00000023604	ENSPLAP00000000228	Ribosomal protein S28.	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	0.644
ENSPLAP00000023604	RPS29	ENSPLAP00000023604	ENSPLAP00000025239	Ribosomal protein S28.	Ribosomal protein S29.	0.998
ENSPLAP00000023604	rpl18	ENSPLAP00000023604	ENSPLAP00000006493	Ribosomal protein S28.	Ribosomal protein L18.	0.996
ENSPLAP00000023604	rpl27	ENSPLAP00000023604	ENSPLAP00000011120	Ribosomal protein S28.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
ENSPLAP00000023604	rpl6	ENSPLAP00000023604	ENSPLAP00000013739	Ribosomal protein S28.	Ribosomal protein L6.	0.999
ENSPLAP00000023604	rps21	ENSPLAP00000023604	ENSPLAP00000000675	Ribosomal protein S28.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
ENSPLAP00000023604	rps23	ENSPLAP00000023604	ENSPLAP00000001743	Ribosomal protein S28.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.999
ENSPLAP00000023604	sec61b	ENSPLAP00000023604	ENSPLAP00000024127	Ribosomal protein S28.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.939
ENSPLAP00000026000	ENSPLAP00000023604	ENSPLAP00000026000	ENSPLAP00000023604	Ribosomal_L18e/L15P domain-containing protein.	Ribosomal protein S28.	0.996
ENSPLAP00000026000	ENSPLAP00000027452	ENSPLAP00000026000	ENSPLAP00000027452	Ribosomal_L18e/L15P domain-containing protein.	Uncharacterized protein.	0.984