25 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TNNI2	Troponin I type 2b (skeletal, fast), tandem duplicate 1. (175 aa)
	LOC106961293	Troponin T type 3a (skeletal, fast). (229 aa)
	ENSPLAP00000000832	Uncharacterized protein. (180 aa)
	ENSPLAP00000000837	Troponin I4a. (72 aa)
	ENSPLAP00000000843	Uncharacterized protein. (99 aa)
	ENSPLAP00000005209	Troponin C type 2 (fast). (157 aa)
	TNNC1	Troponin C type 1a (slow). (163 aa)
	tnnt1	Uncharacterized protein. (247 aa)
	ENSPLAP00000009737	Uncharacterized protein. (230 aa)
	LOC106954216	Troponin T type 2b (cardiac). (227 aa)
	ENSPLAP00000015682	Troponin T2c, cardiac. (236 aa)
	ENSPLAP00000016844	Uncharacterized protein. (215 aa)
	LOC106961381	Uncharacterized protein. (189 aa)
	LOC106961297	Troponin I2, fast skeletal type. (175 aa)
	LOC106961298	Troponin I2, fast skeletal type. (169 aa)
	ENSPLAP00000019508	Uncharacterized protein. (224 aa)
	LOC106945296	Troponin I4b, tandem duplicate 2. (179 aa)
	ENSPLAP00000019530	Troponin I4b, tandem duplicate 2. (72 aa)
	tnnt2	Troponin T type 2a (cardiac). (211 aa)
	LOC106946650	Troponin I type 1a (skeletal, slow). (187 aa)
	ENSPLAP00000020762	Troponin C type 1b (slow). (167 aa)
	LOC106937345	Troponin T type 1 (skeletal, slow). (220 aa)
	ENSPLAP00000022496	EF-hand domain-containing protein. (83 aa)
	LOC106954217	Troponin I type 1b (skeletal, slow). (186 aa)
	ENSPLAP00000030051	Uncharacterized protein. (204 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000832	ENSPLAP00000005209	ENSPLAP00000000832	ENSPLAP00000005209	Uncharacterized protein.	Troponin C type 2 (fast).	0.836
ENSPLAP00000000832	ENSPLAP00000009737	ENSPLAP00000000832	ENSPLAP00000009737	Uncharacterized protein.	Uncharacterized protein.	0.909
ENSPLAP00000000832	ENSPLAP00000015682	ENSPLAP00000000832	ENSPLAP00000015682	Uncharacterized protein.	Troponin T2c, cardiac.	0.878
ENSPLAP00000000832	ENSPLAP00000016844	ENSPLAP00000000832	ENSPLAP00000016844	Uncharacterized protein.	Uncharacterized protein.	0.902
ENSPLAP00000000832	ENSPLAP00000019508	ENSPLAP00000000832	ENSPLAP00000019508	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSPLAP00000000832	ENSPLAP00000020762	ENSPLAP00000000832	ENSPLAP00000020762	Uncharacterized protein.	Troponin C type 1b (slow).	0.851
ENSPLAP00000000832	ENSPLAP00000022496	ENSPLAP00000000832	ENSPLAP00000022496	Uncharacterized protein.	EF-hand domain-containing protein.	0.836
ENSPLAP00000000832	ENSPLAP00000030051	ENSPLAP00000000832	ENSPLAP00000030051	Uncharacterized protein.	Uncharacterized protein.	0.909
ENSPLAP00000000832	LOC106937345	ENSPLAP00000000832	ENSPLAP00000022256	Uncharacterized protein.	Troponin T type 1 (skeletal, slow).	0.901
ENSPLAP00000000832	LOC106954216	ENSPLAP00000000832	ENSPLAP00000011704	Uncharacterized protein.	Troponin T type 2b (cardiac).	0.905
ENSPLAP00000000832	LOC106961293	ENSPLAP00000000832	ENSPLAP00000000701	Uncharacterized protein.	Troponin T type 3a (skeletal, fast).	0.878
ENSPLAP00000000832	LOC106961297	ENSPLAP00000000832	ENSPLAP00000019430	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.632
ENSPLAP00000000832	LOC106961298	ENSPLAP00000000832	ENSPLAP00000019432	Uncharacterized protein.	Troponin I2, fast skeletal type.	0.631
ENSPLAP00000000832	LOC106961381	ENSPLAP00000000832	ENSPLAP00000018301	Uncharacterized protein.	Uncharacterized protein.	0.407
ENSPLAP00000000832	TNNC1	ENSPLAP00000000832	ENSPLAP00000006386	Uncharacterized protein.	Troponin C type 1a (slow).	0.851
ENSPLAP00000000832	TNNI2	ENSPLAP00000000832	ENSPLAP00000030268	Uncharacterized protein.	Troponin I type 2b (skeletal, fast), tandem duplicate 1.	0.631
ENSPLAP00000000832	tnnt1	ENSPLAP00000000832	ENSPLAP00000008224	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSPLAP00000000832	tnnt2	ENSPLAP00000000832	ENSPLAP00000019623	Uncharacterized protein.	Troponin T type 2a (cardiac).	0.878
ENSPLAP00000000837	ENSPLAP00000005209	ENSPLAP00000000837	ENSPLAP00000005209	Troponin I4a.	Troponin C type 2 (fast).	0.836
ENSPLAP00000000837	ENSPLAP00000009737	ENSPLAP00000000837	ENSPLAP00000009737	Troponin I4a.	Uncharacterized protein.	0.908