17 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cops8	COP9 signalosome subunit 8. (187 aa)
	cops7a	COP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
	COPS6	COP9 signalosome subunit 6. (316 aa)
	ATP5F1A	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (548 aa)
	gps1	G protein pathway suppressor 1. (486 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	cops2	COP9 signalosome subunit 2. (443 aa)
	LOC106956663	KRAP_IP3R_bind domain-containing protein. (670 aa)
	LOC106942419	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (349 aa)
	cops4	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
	LOC106939455	Uncharacterized protein. (171 aa)
	cops5	COP9 signalosome subunit 5. (336 aa)
	cops9	COP9 signalosome subunit 9. (57 aa)
	LOC106944955	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (529 aa)
	stoml2	Stomatin (EPB72)-like 2. (365 aa)
	grap	GRB2 related adaptor protein a. (214 aa)
	cops3	COP9 signalosome subunit 3. (423 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1A	LOC106944955	ENSPLAP00000006491	ENSPLAP00000026991	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.978
ATP5F1A	stoml2	ENSPLAP00000006491	ENSPLAP00000027770	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Stomatin (EPB72)-like 2.	0.497
COPS6	LOC106942419	ENSPLAP00000004396	ENSPLAP00000014992	COP9 signalosome subunit 6.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.992
COPS6	cops2	ENSPLAP00000004396	ENSPLAP00000013686	COP9 signalosome subunit 6.	COP9 signalosome subunit 2.	0.999
COPS6	cops3	ENSPLAP00000004396	ENSPLAP00000001046	COP9 signalosome subunit 6.	COP9 signalosome subunit 3.	0.999
COPS6	cops4	ENSPLAP00000004396	ENSPLAP00000021050	COP9 signalosome subunit 6.	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.992
COPS6	cops5	ENSPLAP00000004396	ENSPLAP00000022632	COP9 signalosome subunit 6.	COP9 signalosome subunit 5.	0.999
COPS6	cops7a	ENSPLAP00000004396	ENSPLAP00000002085	COP9 signalosome subunit 6.	COP9 constitutive photomorphogenic homolog subunit 7A.	0.996
COPS6	cops8	ENSPLAP00000004396	ENSPLAP00000008565	COP9 signalosome subunit 6.	COP9 signalosome subunit 8.	0.998
COPS6	cops9	ENSPLAP00000004396	ENSPLAP00000025268	COP9 signalosome subunit 6.	COP9 signalosome subunit 9.	0.665
COPS6	gps1	ENSPLAP00000004396	ENSPLAP00000008703	COP9 signalosome subunit 6.	G protein pathway suppressor 1.	0.999
COPS6	stoml2	ENSPLAP00000004396	ENSPLAP00000027770	COP9 signalosome subunit 6.	Stomatin (EPB72)-like 2.	0.512
LOC106939455	grb2	ENSPLAP00000021438	ENSPLAP00000012052	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.408
LOC106942419	COPS6	ENSPLAP00000014992	ENSPLAP00000004396	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 signalosome subunit 6.	0.992
LOC106942419	cops2	ENSPLAP00000014992	ENSPLAP00000013686	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 signalosome subunit 2.	0.992
LOC106942419	cops3	ENSPLAP00000014992	ENSPLAP00000001046	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 signalosome subunit 3.	0.996
LOC106942419	cops4	ENSPLAP00000014992	ENSPLAP00000021050	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	0.543
LOC106942419	cops5	ENSPLAP00000014992	ENSPLAP00000022632	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 signalosome subunit 5.	0.995
LOC106942419	cops7a	ENSPLAP00000014992	ENSPLAP00000002085	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 constitutive photomorphogenic homolog subunit 7A.	0.990
LOC106942419	cops8	ENSPLAP00000014992	ENSPLAP00000008565	COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).	COP9 signalosome subunit 8.	0.995