36 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	CDC42	Cell division cycle 42. (191 aa)
	drd3	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (454 aa)
	LOC106948523	Uncharacterized protein. (583 aa)
	LOC106951125	Uncharacterized protein. (191 aa)
	LOC106955815	Kinesin family member 23; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1021 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1620 aa)
	ENSPLAP00000004157	HP domain-containing protein. (76 aa)
	LOC106963144	Aurora kinase B; Belongs to the protein kinase superfamily. (331 aa)
	LOC106945181	HP domain-containing protein. (2116 aa)
	poldip2	Polymerase (DNA-directed), delta interacting protein 2. (377 aa)
	LOC106937213	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	LOC106937184	Uncharacterized protein. (664 aa)
	cit	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1846 aa)
	cdc14a	Cell division cycle 14Ab. (593 aa)
	LOC106952231	Uncharacterized protein. (191 aa)
	cdc6	Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (580 aa)
	map10	Uncharacterized protein. (778 aa)
	KIF23	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (894 aa)
	SVIL	Supervillin. (1715 aa)
	LOC106941478	Uncharacterized protein. (491 aa)
	gipc1	GIPC PDZ domain containing family, member 1. (357 aa)
	cenpv	Centromere protein V. (126 aa)
	racgap1	Rac GTPase activating protein 1. (631 aa)
	ENSPLAP00000016946	Uncharacterized protein. (76 aa)
	LOC106937497	Citron rho-interacting serine/threonine kinase b. (1690 aa)
	LOC106957336	Uncharacterized protein. (629 aa)
	gipc3	GIPC PDZ domain containing family, member 3. (332 aa)
	LOC106941957	Epithelial cell transforming 2. (638 aa)
	LOC106951123	Uncharacterized protein. (191 aa)
	ENSPLAP00000020872	annotation not available (76 aa)
	LOC106964683	Cell division cycle 42. (191 aa)
	ENSPLAP00000023997	Uncharacterized protein. (319 aa)
	LOC106954779	Supervillin d. (1335 aa)
	ENSPLAP00000029429	Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family. (347 aa)
	ENSPLAP00000030275	Uncharacterized protein. (114 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	CUL3	ENSPLAP00000001204	ENSPLAP00000015537	Cell division cycle 42.	Cullin 3; Belongs to the cullin family.	0.472
CDC42	KIF23	ENSPLAP00000001204	ENSPLAP00000013759	Cell division cycle 42.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.409
CDC42	LOC106937184	ENSPLAP00000001204	ENSPLAP00000007598	Cell division cycle 42.	Uncharacterized protein.	0.822
CDC42	LOC106937213	ENSPLAP00000001204	ENSPLAP00000007312	Cell division cycle 42.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.472
CDC42	LOC106937497	ENSPLAP00000001204	ENSPLAP00000017498	Cell division cycle 42.	Citron rho-interacting serine/threonine kinase b.	0.518
CDC42	LOC106941957	ENSPLAP00000001204	ENSPLAP00000020635	Cell division cycle 42.	Epithelial cell transforming 2.	0.803
CDC42	LOC106951123	ENSPLAP00000001204	ENSPLAP00000020734	Cell division cycle 42.	Uncharacterized protein.	0.837
CDC42	LOC106951125	ENSPLAP00000001204	ENSPLAP00000002512	Cell division cycle 42.	Uncharacterized protein.	0.854
CDC42	LOC106952231	ENSPLAP00000001204	ENSPLAP00000009810	Cell division cycle 42.	Uncharacterized protein.	0.878
CDC42	LOC106955815	ENSPLAP00000001204	ENSPLAP00000002709	Cell division cycle 42.	Kinesin family member 23; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.409
CDC42	LOC106957336	ENSPLAP00000001204	ENSPLAP00000017574	Cell division cycle 42.	Uncharacterized protein.	0.822
CDC42	cit	ENSPLAP00000001204	ENSPLAP00000008081	Cell division cycle 42.	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.518
CDC42	racgap1	ENSPLAP00000001204	ENSPLAP00000016150	Cell division cycle 42.	Rac GTPase activating protein 1.	0.822
CUL3	CDC42	ENSPLAP00000015537	ENSPLAP00000001204	Cullin 3; Belongs to the cullin family.	Cell division cycle 42.	0.472
CUL3	LOC106937213	ENSPLAP00000015537	ENSPLAP00000007312	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.923
CUL3	LOC106951123	ENSPLAP00000015537	ENSPLAP00000020734	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.472
CUL3	LOC106951125	ENSPLAP00000015537	ENSPLAP00000002512	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.472
CUL3	LOC106952231	ENSPLAP00000015537	ENSPLAP00000009810	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.472
CUL3	LOC106963144	ENSPLAP00000015537	ENSPLAP00000004379	Cullin 3; Belongs to the cullin family.	Aurora kinase B; Belongs to the protein kinase superfamily.	0.758
CUL3	LOC106964683	ENSPLAP00000015537	ENSPLAP00000021331	Cullin 3; Belongs to the cullin family.	Cell division cycle 42.	0.472