10 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	ENSPLAP00000002631	Uncharacterized protein. (75 aa)
	ENSPLAP00000000084	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	ENSPLAP00000011100	Small nuclear ribonucleoprotein-associated protein. (230 aa)
	WDR77	WD repeat domain 77. (334 aa)
	prmt5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (631 aa)
	clns1a	Chloride channel, nucleotide-sensitive, 1A. (250 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000084	ENSPLAP00000002631	ENSPLAP00000000084	ENSPLAP00000002631	Small nuclear ribonucleoprotein polypeptide F.	Uncharacterized protein.	0.999
ENSPLAP00000000084	ENSPLAP00000011100	ENSPLAP00000000084	ENSPLAP00000011100	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein-associated protein.	0.997
ENSPLAP00000000084	WDR77	ENSPLAP00000000084	ENSPLAP00000011931	Small nuclear ribonucleoprotein polypeptide F.	WD repeat domain 77.	0.663
ENSPLAP00000000084	clns1a	ENSPLAP00000000084	ENSPLAP00000031264	Small nuclear ribonucleoprotein polypeptide F.	Chloride channel, nucleotide-sensitive, 1A.	0.955
ENSPLAP00000000084	prmt5	ENSPLAP00000000084	ENSPLAP00000028598	Small nuclear ribonucleoprotein polypeptide F.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.592
ENSPLAP00000000084	snrpd1	ENSPLAP00000000084	ENSPLAP00000004927	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSPLAP00000000084	snrpd2	ENSPLAP00000000084	ENSPLAP00000008218	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPLAP00000000084	snrpd3	ENSPLAP00000000084	ENSPLAP00000031332	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSPLAP00000000084	snrpe	ENSPLAP00000000084	ENSPLAP00000003493	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ENSPLAP00000002631	ENSPLAP00000000084	ENSPLAP00000002631	ENSPLAP00000000084	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide F.	0.999
ENSPLAP00000002631	ENSPLAP00000011100	ENSPLAP00000002631	ENSPLAP00000011100	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.994
ENSPLAP00000002631	WDR77	ENSPLAP00000002631	ENSPLAP00000011931	Uncharacterized protein.	WD repeat domain 77.	0.749
ENSPLAP00000002631	clns1a	ENSPLAP00000002631	ENSPLAP00000031264	Uncharacterized protein.	Chloride channel, nucleotide-sensitive, 1A.	0.981
ENSPLAP00000002631	prmt5	ENSPLAP00000002631	ENSPLAP00000028598	Uncharacterized protein.	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.828
ENSPLAP00000002631	snrpd2	ENSPLAP00000002631	ENSPLAP00000008218	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPLAP00000002631	snrpd3	ENSPLAP00000002631	ENSPLAP00000031332	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSPLAP00000002631	snrpe	ENSPLAP00000002631	ENSPLAP00000003493	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ENSPLAP00000011100	ENSPLAP00000000084	ENSPLAP00000011100	ENSPLAP00000000084	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein polypeptide F.	0.997
ENSPLAP00000011100	ENSPLAP00000002631	ENSPLAP00000011100	ENSPLAP00000002631	Small nuclear ribonucleoprotein-associated protein.	Uncharacterized protein.	0.994
ENSPLAP00000011100	WDR77	ENSPLAP00000011100	ENSPLAP00000011931	Small nuclear ribonucleoprotein-associated protein.	WD repeat domain 77.	0.792