19 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
	gemin8	Gem (nuclear organelle) associated protein 8. (197 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (773 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	LOC106942356	Gem-associated protein 5-like. (1479 aa)
	gemin7	Gem (nuclear organelle) associated protein 7. (128 aa)
	gemin2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
	gemin6	Gem (nuclear organelle) associated protein 6. (200 aa)
	ENSPLAP00000011100	Small nuclear ribonucleoprotein-associated protein. (230 aa)
	ENSPLAP00000002631	Uncharacterized protein. (75 aa)
	LOC106942475	Gem (nuclear organelle) associated protein 5. (1479 aa)
	LOC106941750	Survival of motor neuron 1, telomeric. (283 aa)
	LOC106943238	WD_REPEATS_REGION domain-containing protein. (1186 aa)
	ENSPLAP00000000084	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	gemin4	Gem (nuclear organelle) associated protein 4. (1117 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	strap	Serine/threonine kinase receptor associated protein. (329 aa)
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000084	ENSPLAP00000002631	ENSPLAP00000000084	ENSPLAP00000002631	Small nuclear ribonucleoprotein polypeptide F.	Uncharacterized protein.	0.999
ENSPLAP00000000084	ENSPLAP00000011100	ENSPLAP00000000084	ENSPLAP00000011100	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein-associated protein.	0.997
ENSPLAP00000000084	LOC106941750	ENSPLAP00000000084	ENSPLAP00000025219	Small nuclear ribonucleoprotein polypeptide F.	Survival of motor neuron 1, telomeric.	0.973
ENSPLAP00000000084	LOC106942356	ENSPLAP00000000084	ENSPLAP00000029343	Small nuclear ribonucleoprotein polypeptide F.	Gem-associated protein 5-like.	0.746
ENSPLAP00000000084	LOC106942475	ENSPLAP00000000084	ENSPLAP00000028622	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 5.	0.746
ENSPLAP00000000084	LOC106943238	ENSPLAP00000000084	ENSPLAP00000016148	Small nuclear ribonucleoprotein polypeptide F.	WD_REPEATS_REGION domain-containing protein.	0.746
ENSPLAP00000000084	ddx20	ENSPLAP00000000084	ENSPLAP00000007523	Small nuclear ribonucleoprotein polypeptide F.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.891
ENSPLAP00000000084	gemin2	ENSPLAP00000000084	ENSPLAP00000029762	Small nuclear ribonucleoprotein polypeptide F.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.984
ENSPLAP00000000084	gemin4	ENSPLAP00000000084	ENSPLAP00000004605	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 4.	0.811
ENSPLAP00000000084	gemin6	ENSPLAP00000000084	ENSPLAP00000008572	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 6.	0.665
ENSPLAP00000000084	gemin7	ENSPLAP00000000084	ENSPLAP00000029736	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 7.	0.661
ENSPLAP00000000084	gemin8	ENSPLAP00000000084	ENSPLAP00000004934	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 8.	0.842
ENSPLAP00000000084	snrpd1	ENSPLAP00000000084	ENSPLAP00000004927	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSPLAP00000000084	snrpd2	ENSPLAP00000000084	ENSPLAP00000008218	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPLAP00000000084	snrpd3	ENSPLAP00000000084	ENSPLAP00000031332	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSPLAP00000000084	snrpe	ENSPLAP00000000084	ENSPLAP00000003493	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ENSPLAP00000000084	snrpg	ENSPLAP00000000084	ENSPLAP00000005394	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein G.	0.999
ENSPLAP00000002631	ENSPLAP00000000084	ENSPLAP00000002631	ENSPLAP00000000084	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide F.	0.999
ENSPLAP00000002631	ENSPLAP00000011100	ENSPLAP00000002631	ENSPLAP00000011100	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.994
ENSPLAP00000002631	LOC106941750	ENSPLAP00000002631	ENSPLAP00000025219	Uncharacterized protein.	Survival of motor neuron 1, telomeric.	0.980