10 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106953622	T-box transcription factor Ta. (421 aa)
	LOC106963330	Notch receptor 1a. (2447 aa)
	bmp2	Bone morphogenetic protein 2b. (409 aa)
	LOC106949849	Mesoderm posterior ba. (249 aa)
	dkk1	TNFR-Cys domain-containing protein. (251 aa)
	LOC106959697	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (216 aa)
	LOC106945036	Fibroblast growth factor receptor. (831 aa)
	LOC106948175	POU domain protein. (476 aa)
	LOC106954293	Notch receptor 1b. (2443 aa)
	LOC106934858	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (195 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106934858	LOC106945036	ENSPLAP00000026771	ENSPLAP00000010200	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.982
LOC106934858	LOC106953622	ENSPLAP00000026771	ENSPLAP00000006799	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	T-box transcription factor Ta.	0.546
LOC106934858	LOC106959697	ENSPLAP00000026771	ENSPLAP00000009483	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.566
LOC106934858	dkk1	ENSPLAP00000026771	ENSPLAP00000009481	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	TNFR-Cys domain-containing protein.	0.413
LOC106945036	LOC106934858	ENSPLAP00000010200	ENSPLAP00000026771	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.982
LOC106945036	LOC106959697	ENSPLAP00000010200	ENSPLAP00000009483	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.938
LOC106948175	LOC106953622	ENSPLAP00000017983	ENSPLAP00000006799	POU domain protein.	T-box transcription factor Ta.	0.711
LOC106953622	LOC106934858	ENSPLAP00000006799	ENSPLAP00000026771	T-box transcription factor Ta.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.546
LOC106953622	LOC106948175	ENSPLAP00000006799	ENSPLAP00000017983	T-box transcription factor Ta.	POU domain protein.	0.711
LOC106953622	bmp2	ENSPLAP00000006799	ENSPLAP00000003581	T-box transcription factor Ta.	Bone morphogenetic protein 2b.	0.434
LOC106959697	LOC106934858	ENSPLAP00000009483	ENSPLAP00000026771	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.566
LOC106959697	LOC106945036	ENSPLAP00000009483	ENSPLAP00000010200	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor.	0.938
bmp2	LOC106953622	ENSPLAP00000003581	ENSPLAP00000006799	Bone morphogenetic protein 2b.	T-box transcription factor Ta.	0.434
dkk1	LOC106934858	ENSPLAP00000009481	ENSPLAP00000026771	TNFR-Cys domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.413