46 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106948518	SET and MYND domain containing 1b. (476 aa)
	ENSPLAP00000002770	Basic helix-loop-helix family, member a15. (192 aa)
	xbp1	X-box binding protein 1. (384 aa)
	LOC106944326	Mothers against decapentaplegic homolog. (503 aa)
	LOC106949305	RNA binding motif protein 24a. (249 aa)
	ENSPLAP00000005122	Uncharacterized protein. (139 aa)
	LOC106949849	Mesoderm posterior ba. (249 aa)
	LOC106939239	Mothers against decapentaplegic homolog. (534 aa)
	carm1	Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (581 aa)
	dkk1	TNFR-Cys domain-containing protein. (251 aa)
	LOC106947659	Mitogen-activated protein kinase. (364 aa)
	LOC106960475	Mitogen-activated protein kinase. (357 aa)
	sox6	HMG box domain-containing protein. (689 aa)
	PLPP7	Phospholipid phosphatase 7 (inactive). (266 aa)
	fbxo22	F-box protein 22. (387 aa)
	ENSPLAP00000013666	Myogenin. (274 aa)
	nkx2-5	NK2 homeobox 5. (318 aa)
	LOC106964217	RUN and SH3 domain containing 1. (538 aa)
	LOC106955687	Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
	ENSPLAP00000016634	Myogenic factor. (268 aa)
	LOC106941359	Mechanistic target of rapamycin kinase. (927 aa)
	gsk3b	Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily. (421 aa)
	msx1	Muscle segment homeobox 1a. (238 aa)
	bmp4	Bone morphogenetic protein 4. (401 aa)
	LOC106961276	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
	LOC106937460	Mothers against decapentaplegic homolog. (510 aa)
	RBM38	RNA binding motif protein 38. (246 aa)
	LOC106938023	Uncharacterized LOC106938023. (507 aa)
	ENSPLAP00000020756	Uncharacterized protein. (289 aa)
	ENSPLAP00000021271	SCP domain-containing protein; Belongs to the CRISP family. (293 aa)
	ENSPLAP00000021328	Uncharacterized protein. (148 aa)
	LOC106961338	RRM domain-containing protein. (254 aa)
	LOC106955117	Mitogen-activated protein kinase. (360 aa)
	LOC106957123	A kinase (PRKA) anchor protein 6. (2225 aa)
	LOC106962670	SRY-box transcription factor 6. (781 aa)
	LOC106937266	Uncharacterized protein. (124 aa)
	CCN3	Cellular communication network factor 3. (412 aa)
	tomm70	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
	bhlhe41	Basic helix-loop-helix family, member e41. (421 aa)
	ENSPLAP00000027457	Tripartite motif containing 32. (683 aa)
	LOC106946879	Endothelin 1. (183 aa)
	LOC106941517	Poly [ADP-ribose] polymerase. (385 aa)
	rbm24	RNA binding motif protein 24b. (238 aa)
	LOC106944807	Muscle segment homeobox 3. (212 aa)
	LOC106939157	Bone morphogenetic protein 16. (477 aa)
	ENSPLAP00000031114	FCP1 homology domain-containing protein. (324 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002770	bhlhe41	ENSPLAP00000002770	ENSPLAP00000027196	Basic helix-loop-helix family, member a15.	Basic helix-loop-helix family, member e41.	0.419
ENSPLAP00000005122	LOC106937460	ENSPLAP00000005122	ENSPLAP00000019866	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.647
ENSPLAP00000005122	LOC106939239	ENSPLAP00000005122	ENSPLAP00000006841	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.647
ENSPLAP00000005122	LOC106944326	ENSPLAP00000005122	ENSPLAP00000003577	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.647
ENSPLAP00000013666	ENSPLAP00000016634	ENSPLAP00000013666	ENSPLAP00000016634	Myogenin.	Myogenic factor.	0.616
ENSPLAP00000013666	LOC106947659	ENSPLAP00000013666	ENSPLAP00000009686	Myogenin.	Mitogen-activated protein kinase.	0.523
ENSPLAP00000013666	LOC106955117	ENSPLAP00000013666	ENSPLAP00000021665	Myogenin.	Mitogen-activated protein kinase.	0.523
ENSPLAP00000013666	LOC106960475	ENSPLAP00000013666	ENSPLAP00000010381	Myogenin.	Mitogen-activated protein kinase.	0.523
ENSPLAP00000013666	LOC106962670	ENSPLAP00000013666	ENSPLAP00000022652	Myogenin.	SRY-box transcription factor 6.	0.424
ENSPLAP00000016634	ENSPLAP00000013666	ENSPLAP00000016634	ENSPLAP00000013666	Myogenic factor.	Myogenin.	0.616
ENSPLAP00000021328	LOC106937460	ENSPLAP00000021328	ENSPLAP00000019866	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.405
ENSPLAP00000021328	LOC106939157	ENSPLAP00000021328	ENSPLAP00000029728	Uncharacterized protein.	Bone morphogenetic protein 16.	0.427
ENSPLAP00000021328	LOC106939239	ENSPLAP00000021328	ENSPLAP00000006841	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.405
ENSPLAP00000021328	LOC106941359	ENSPLAP00000021328	ENSPLAP00000016783	Uncharacterized protein.	Mechanistic target of rapamycin kinase.	0.573
ENSPLAP00000021328	LOC106944326	ENSPLAP00000021328	ENSPLAP00000003577	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.405
ENSPLAP00000021328	LOC106947659	ENSPLAP00000021328	ENSPLAP00000009686	Uncharacterized protein.	Mitogen-activated protein kinase.	0.417
ENSPLAP00000021328	LOC106955117	ENSPLAP00000021328	ENSPLAP00000021665	Uncharacterized protein.	Mitogen-activated protein kinase.	0.417
ENSPLAP00000021328	LOC106960475	ENSPLAP00000021328	ENSPLAP00000010381	Uncharacterized protein.	Mitogen-activated protein kinase.	0.417
ENSPLAP00000021328	bhlhe41	ENSPLAP00000021328	ENSPLAP00000027196	Uncharacterized protein.	Basic helix-loop-helix family, member e41.	0.559
ENSPLAP00000021328	bmp4	ENSPLAP00000021328	ENSPLAP00000019124	Uncharacterized protein.	Bone morphogenetic protein 4.	0.427