9 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VANGL2	Vang-like protein. (485 aa)
	LOC106957188	Vang-like protein. (525 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (842 aa)
	LOC106962322	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (372 aa)
	chrd	Chordin; Belongs to the chordin family. (933 aa)
	LOC106957970	Mothers against decapentaplegic homolog. (475 aa)
	bmp2	Bone morphogenetic protein 2b. (409 aa)
	LOC106941263	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (378 aa)
	ENSPLAP00000007322	Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (175 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106941263	LOC106957188	ENSPLAP00000003997	ENSPLAP00000019954	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.503
LOC106941263	LOC106962322	ENSPLAP00000003997	ENSPLAP00000027647	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.954
LOC106941263	VANGL2	ENSPLAP00000003997	ENSPLAP00000008392	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.503
LOC106957188	LOC106941263	ENSPLAP00000019954	ENSPLAP00000003997	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.503
LOC106957188	LOC106962322	ENSPLAP00000019954	ENSPLAP00000027647	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.503
LOC106957188	VANGL2	ENSPLAP00000019954	ENSPLAP00000008392	Vang-like protein.	Vang-like protein.	0.888
LOC106957970	bmp2	ENSPLAP00000021236	ENSPLAP00000003581	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 2b.	0.734
LOC106957970	chrd	ENSPLAP00000021236	ENSPLAP00000025317	Mothers against decapentaplegic homolog.	Chordin; Belongs to the chordin family.	0.575
LOC106962322	LOC106941263	ENSPLAP00000027647	ENSPLAP00000003997	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.954
LOC106962322	LOC106957188	ENSPLAP00000027647	ENSPLAP00000019954	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.503
LOC106962322	VANGL2	ENSPLAP00000027647	ENSPLAP00000008392	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.503
LOC106962322	bmp2	ENSPLAP00000027647	ENSPLAP00000003581	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Bone morphogenetic protein 2b.	0.425
VANGL2	LOC106941263	ENSPLAP00000008392	ENSPLAP00000003997	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.503
VANGL2	LOC106957188	ENSPLAP00000008392	ENSPLAP00000019954	Vang-like protein.	Vang-like protein.	0.888
VANGL2	LOC106962322	ENSPLAP00000008392	ENSPLAP00000027647	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.503
bmp2	LOC106957970	ENSPLAP00000003581	ENSPLAP00000021236	Bone morphogenetic protein 2b.	Mothers against decapentaplegic homolog.	0.734
bmp2	LOC106962322	ENSPLAP00000003581	ENSPLAP00000027647	Bone morphogenetic protein 2b.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.425
bmp2	chrd	ENSPLAP00000003581	ENSPLAP00000025317	Bone morphogenetic protein 2b.	Chordin; Belongs to the chordin family.	0.989
chrd	LOC106957970	ENSPLAP00000025317	ENSPLAP00000021236	Chordin; Belongs to the chordin family.	Mothers against decapentaplegic homolog.	0.575
chrd	bmp2	ENSPLAP00000025317	ENSPLAP00000003581	Chordin; Belongs to the chordin family.	Bone morphogenetic protein 2b.	0.989