66 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tgfb3	Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
	nodal	Nodal-related 2. (376 aa)
	mstn	Myostatin b. (375 aa)
	smad1	Mothers against decapentaplegic homolog. (467 aa)
	gdf3	Growth differentiation factor 3. (373 aa)
	cited1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (152 aa)
	ENSPLAP00000002840	TGF_BETA_2 domain-containing protein. (129 aa)
	LOC106964710	Inhibin subunit beta Aa. (400 aa)
	LOC106944344	Bone morphogenetic protein 10, like. (462 aa)
	LOC106944326	Mothers against decapentaplegic homolog. (503 aa)
	LOC106938824	Mothers against decapentaplegic homolog. (474 aa)
	LOC106956597	Membrane associated guanylate kinase, WW and PDZ domain containing 2b. (1522 aa)
	ENSPLAP00000004404	Uncharacterized protein. (173 aa)
	LOC106947109	RNA binding motif protein 4.3. (348 aa)
	smad7	Mothers against decapentaplegic homolog. (364 aa)
	smad3	Mothers against decapentaplegic homolog. (425 aa)
	LOC106934411	Mothers against decapentaplegic homolog. (467 aa)
	LOC106939239	Mothers against decapentaplegic homolog. (534 aa)
	jun	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (288 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	LOC106940894	Mothers against decapentaplegic homolog. (464 aa)
	itgb6	Integrin beta; Belongs to the integrin beta chain family. (780 aa)
	smad6	Mothers against decapentaplegic homolog. (490 aa)
	gdf10	Growth differentiation factor 10b. (407 aa)
	gdf2	Growth differentiation factor 2. (416 aa)
	LOC106962382	Growth/differentiation factor 2-like. (416 aa)
	slc33a1	Solute carrier family 33 member 1. (550 aa)
	LOC106942461	Myostatin a. (363 aa)
	LOC106936703	Transforming growth factor beta; Belongs to the TGF-beta family. (399 aa)
	gdf6	Growth differentiation factor 6a. (418 aa)
	smad9	Mothers against decapentaplegic homolog. (467 aa)
	LOC106956726	JunE proto-oncogene, AP-1 transcription factor subunit. (323 aa)
	LOC106939157	Bone morphogenetic protein 16. (477 aa)
	LOC106943320	TGF_BETA_2 domain-containing protein. (143 aa)
	ENSPLAP00000028836	V-ski avian sarcoma viral oncogene homolog a. (269 aa)
	LOC106937625	TGF_BETA_2 domain-containing protein. (365 aa)
	INHBC	Inhibin subunit beta C. (380 aa)
	LOC106954704	Growth differentiation factor 11. (402 aa)
	LOC106959542	Southpaw. (408 aa)
	bmp3	Bone morphogenetic protein 3. (463 aa)
	LOC106962381	Growth differentiation factor 10b. (438 aa)
	LOC106949081	Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
	inhba	TGF_BETA_2 domain-containing protein. (384 aa)
	bmp10	Bone morphogenetic protein 10. (488 aa)
	bmp5	Bone morphogenetic protein 5. (460 aa)
	LOC106959732	Mothers against decapentaplegic homolog. (332 aa)
	jade2	Jade family PHD finger 2. (765 aa)
	LOC106937194	Inhibin subunit beta B. (393 aa)
	INHBB	Inhibin subunit beta B. (396 aa)
	LOC106937757	Bone morphogenetic protein 7b. (427 aa)
	inha	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family. (345 aa)
	LOC106939343	Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (563 aa)
	LOC106947113	Uncharacterized protein. (347 aa)
	ENSPLAP00000021339	TGF_BETA_2 domain-containing protein. (254 aa)
	LOC106957970	Mothers against decapentaplegic homolog. (475 aa)
	bmp15	Bone morphogenetic protein 15. (437 aa)
	LOC106951105	Left-right determination factor. (361 aa)
	ENSPLAP00000020814	Uncharacterized protein. (201 aa)
	tgfb2	Transforming growth factor beta; Belongs to the TGF-beta family. (414 aa)
	LOC106953268	Bone morphogenetic protein 7a. (450 aa)
	LOC106937460	Mothers against decapentaplegic homolog. (510 aa)
	bmp4	Bone morphogenetic protein 4. (401 aa)
	gdf5	Growth differentiation factor 5. (486 aa)
	LOC106961462	Bone morphogenetic protein 6. (428 aa)
	LOC106944781	TGF_BETA_2 domain-containing protein. (499 aa)
	bmp8a	Bone morphogenetic protein 8a. (436 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002840	INHBC	ENSPLAP00000002840	ENSPLAP00000028508	TGF_BETA_2 domain-containing protein.	Inhibin subunit beta C.	0.924
ENSPLAP00000002840	LOC106934411	ENSPLAP00000002840	ENSPLAP00000006394	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.464
ENSPLAP00000002840	LOC106937460	ENSPLAP00000002840	ENSPLAP00000019866	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.401
ENSPLAP00000002840	LOC106938824	ENSPLAP00000002840	ENSPLAP00000003833	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.465
ENSPLAP00000002840	LOC106939157	ENSPLAP00000002840	ENSPLAP00000029728	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 16.	0.563
ENSPLAP00000002840	LOC106939239	ENSPLAP00000002840	ENSPLAP00000006841	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.401
ENSPLAP00000002840	LOC106940894	ENSPLAP00000002840	ENSPLAP00000010253	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.464
ENSPLAP00000002840	LOC106944326	ENSPLAP00000002840	ENSPLAP00000003577	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.401
ENSPLAP00000002840	LOC106951105	ENSPLAP00000002840	ENSPLAP00000020854	TGF_BETA_2 domain-containing protein.	Left-right determination factor.	0.958
ENSPLAP00000002840	LOC106957970	ENSPLAP00000002840	ENSPLAP00000021236	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.432
ENSPLAP00000002840	LOC106959542	ENSPLAP00000002840	ENSPLAP00000027911	TGF_BETA_2 domain-containing protein.	Southpaw.	0.923
ENSPLAP00000002840	SMAD3	ENSPLAP00000002840	ENSPLAP00000008877	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.464
ENSPLAP00000002840	bmp4	ENSPLAP00000002840	ENSPLAP00000019124	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.563
ENSPLAP00000002840	gdf3	ENSPLAP00000002840	ENSPLAP00000002240	TGF_BETA_2 domain-containing protein.	Growth differentiation factor 3.	0.794
ENSPLAP00000002840	nodal	ENSPLAP00000002840	ENSPLAP00000000222	TGF_BETA_2 domain-containing protein.	Nodal-related 2.	0.923
ENSPLAP00000002840	smad1	ENSPLAP00000002840	ENSPLAP00000002062	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.432
ENSPLAP00000002840	smad3	ENSPLAP00000002840	ENSPLAP00000005904	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.464
ENSPLAP00000002840	smad6	ENSPLAP00000002840	ENSPLAP00000011030	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.414
ENSPLAP00000002840	smad9	ENSPLAP00000002840	ENSPLAP00000030079	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.432
ENSPLAP00000020814	LOC106939343	ENSPLAP00000020814	ENSPLAP00000022435	Uncharacterized protein.	Membrane associated guanylate kinase, WW and PDZ domain containing 2a.	0.641