STRINGSTRING
LOC106959564 LOC106959564 smyd2 smyd2 LOC106935944 LOC106935944 dhx9 dhx9 LOC106950580 LOC106950580 wdr43 wdr43 phrf1 phrf1 LOC106954525 LOC106954525 LOC106937926 LOC106937926 rpap2 rpap2 znf326 znf326 gtf2b gtf2b ENSPLAP00000004412 ENSPLAP00000004412 IWS1 IWS1 YTHDC2 YTHDC2 leo1 leo1 fbf1 fbf1 cdc73 cdc73 LOC106941053 LOC106941053 rtraf rtraf ENSPLAP00000008116 ENSPLAP00000008116 ercc5 ercc5 ppib ppib STOML3 STOML3 brca1 brca1 LOC106955574 LOC106955574 supt4h1 supt4h1 ENSPLAP00000010685 ENSPLAP00000010685 uri1 uri1 LOC106957605 LOC106957605 LOC106958997 LOC106958997 LOC106938975 LOC106938975 pcf11 pcf11 rrn3 rrn3 bivm bivm SMYD3 SMYD3 LOC106934797 LOC106934797 taf10 taf10 ENSPLAP00000014309 ENSPLAP00000014309 ELOF1 ELOF1 LOC106955458 LOC106955458 LOC106944827 LOC106944827 rprd2 rprd2 recql5 recql5 wac wac SCAF8 SCAF8 maf1 maf1 paf1 paf1 scaf1 scaf1 rtf1 rtf1 spty2d1 spty2d1 LOC106939460 LOC106939460 LOC106937384 LOC106937384 LOC106939397 LOC106939397 tcerg1 tcerg1 ENSPLAP00000024369 ENSPLAP00000024369 pcif1 pcif1 LOC106956887 LOC106956887 LOC106964943 LOC106964943 rprd1b rprd1b ctr9 ctr9 uvssa uvssa ccnt2 ccnt2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106959564Uncharacterized protein. (350 aa)
smyd2Uncharacterized protein. (435 aa)
LOC106935944B30.2/SPRY domain-containing protein. (694 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1227 aa)
LOC106950580SR-related CTD-associated factor 4a. (815 aa)
wdr43WD repeat domain 43. (650 aa)
phrf1Uncharacterized protein. (1728 aa)
LOC106954525Regulation of nuclear pre-mRNA domain containing 1A. (294 aa)
LOC106937926SR-related CTD associated factor 4. (763 aa)
rpap2RNA polymerase II associated protein 2. (591 aa)
znf326Uncharacterized protein; Belongs to the AKAP95 family. (428 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
ENSPLAP00000004412WW domain-containing protein. (283 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (721 aa)
YTHDC2YTH domain containing 2. (1391 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (662 aa)
fbf1Uncharacterized protein. (1101 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
LOC106941053PHB domain-containing protein. (302 aa)
rtrafRNA transcription, translation and transport factor. (245 aa)
ENSPLAP00000008116Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (78 aa)
ercc5Excision repair cross-complementation group 5. (1095 aa)
ppibPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
STOML3Stomatin (EPB72)-like 3a. (288 aa)
brca1Uncharacterized protein. (1315 aa)
LOC106955574Stomatin. (258 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ENSPLAP00000010685Uncharacterized protein. (265 aa)
uri1URI1 prefoldin like chaperone. (496 aa)
LOC106957605PHB domain-containing protein. (180 aa)
LOC106958997SET and MYND domain containing 2a. (435 aa)
LOC106938975Gsg1-like. (310 aa)
pcf11PCF11 cleavage and polyadenylation factor subunit. (1625 aa)
rrn3RRN3 homolog, RNA polymerase I transcription factor. (612 aa)
bivmBasic, immunoglobulin-like variable motif containing. (502 aa)
SMYD3SET and MYND domain containing 3. (437 aa)
LOC106934797Uncharacterized protein. (1208 aa)
taf10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
ENSPLAP00000014309Cyclin N-terminal domain-containing protein. (188 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
LOC106955458Regulation of nuclear pre-mRNA domain containing 2b. (1171 aa)
LOC106944827WW domain-containing protein. (511 aa)
rprd2Regulation of nuclear pre-mRNA domain containing 2a. (1077 aa)
recql5RecQ helicase-like 5. (1012 aa)
wacWW domain containing adaptor with coiled-coil a. (543 aa)
SCAF8SR-related CTD associated factor 8. (1382 aa)
maf1Repressor of RNA polymerase III transcription MAF1; Element of the TORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (245 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (530 aa)
scaf1SR-related CTD-associated factor 1. (1316 aa)
rtf1RTF1 homolog, Paf1/RNA polymerase II complex component. (673 aa)
spty2d1SPT2 chromatin protein domain containing 1. (709 aa)
LOC106939460B30.2/SPRY domain-containing protein. (690 aa)
LOC106937384Uncharacterized protein. (294 aa)
LOC106939397PHB domain-containing protein. (242 aa)
tcerg1Uncharacterized protein. (1051 aa)
ENSPLAP00000024369B30.2/SPRY domain-containing protein. (701 aa)
pcif1PDX1 C-terminal inhibiting factor 1. (726 aa)
LOC106956887Stomatin (EPB72)-like 3b. (234 aa)
LOC106964943Cyclin T1; Belongs to the cyclin family. (684 aa)
rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (328 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1154 aa)
uvssaUV-stimulated scaffold protein A. (687 aa)
ccnt2Cyclin T2; Belongs to the cyclin family. (693 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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