STRINGSTRING
ENSPLAP00000000084 ENSPLAP00000000084 ENSPLAP00000002631 ENSPLAP00000002631 snrpe snrpe snrpd1 snrpd1 crnkl1 crnkl1 eftud2 eftud2 snrpd2 snrpd2 dhx8 dhx8 ENSPLAP00000011100 ENSPLAP00000011100 cdc40 cdc40 rbm22 rbm22 prpf19 prpf19 aqr aqr cwc22 cwc22 snrpa1 snrpa1 LOC106937515 LOC106937515 plrg1 plrg1 syf2 syf2 bcas2 bcas2 snrnp40 snrnp40 ppie ppie snw1 snw1 ppil1 ppil1 prpf8 prpf8 dhx34 dhx34 xab2 xab2 cwc15 cwc15 snrpd3 snrpd3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPLAP00000000084Small nuclear ribonucleoprotein polypeptide F. (85 aa)
ENSPLAP00000002631Uncharacterized protein. (75 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (769 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1252 aa)
ENSPLAP00000011100Small nuclear ribonucleoprotein-associated protein. (230 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
rbm22RNA binding motif protein 22. (426 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
aqrAquarius intron-binding spliceosomal factor. (1468 aa)
cwc22CWC22 spliceosome associated protein homolog. (1003 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (258 aa)
LOC106937515pre-mRNA-processing factor 17-like. (581 aa)
plrg1Pleiotropic regulator 1. (513 aa)
syf2SYF2 pre-mRNA-splicing factor. (289 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
snw1SNW domain containing 1. (536 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
prpf8Pre-mRNA processing factor 8. (2323 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1146 aa)
xab2XPA binding protein 2. (849 aa)
cwc15CWC15 spliceosome associated protein homolog. (238 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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