14 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	prpf18	PRP18 pre-mRNA processing factor 18 homolog (yeast). (341 aa)
	ddx23	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (804 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
	snrnp200	Small nuclear ribonucleoprotein 200 (U5). (1841 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	cd2bp2	CD2 (cytoplasmic tail) binding protein 2. (379 aa)
	ENSPLAP00000004942	SEC63 domain-containing protein. (153 aa)
	ENSPLAP00000002631	Uncharacterized protein. (75 aa)
	txnl4a	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
	ENSPLAP00000011100	Small nuclear ribonucleoprotein-associated protein. (230 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	txnl4b	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	prpf8	Pre-mRNA processing factor 8. (2323 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002631	ENSPLAP00000004942	ENSPLAP00000002631	ENSPLAP00000004942	Uncharacterized protein.	SEC63 domain-containing protein.	0.946
ENSPLAP00000002631	ENSPLAP00000011100	ENSPLAP00000002631	ENSPLAP00000011100	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.994
ENSPLAP00000002631	cd2bp2	ENSPLAP00000002631	ENSPLAP00000007093	Uncharacterized protein.	CD2 (cytoplasmic tail) binding protein 2.	0.676
ENSPLAP00000002631	ddx23	ENSPLAP00000002631	ENSPLAP00000021346	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.	0.976
ENSPLAP00000002631	prpf18	ENSPLAP00000002631	ENSPLAP00000027490	Uncharacterized protein.	PRP18 pre-mRNA processing factor 18 homolog (yeast).	0.730
ENSPLAP00000002631	prpf8	ENSPLAP00000002631	ENSPLAP00000029997	Uncharacterized protein.	Pre-mRNA processing factor 8.	0.979
ENSPLAP00000002631	snrnp200	ENSPLAP00000002631	ENSPLAP00000004842	Uncharacterized protein.	Small nuclear ribonucleoprotein 200 (U5).	0.946
ENSPLAP00000002631	snrpd2	ENSPLAP00000002631	ENSPLAP00000008218	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPLAP00000002631	snrpd3	ENSPLAP00000002631	ENSPLAP00000031332	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSPLAP00000002631	snrpg	ENSPLAP00000002631	ENSPLAP00000005394	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.999
ENSPLAP00000002631	txnl4a	ENSPLAP00000002631	ENSPLAP00000013624	Uncharacterized protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.917
ENSPLAP00000002631	txnl4b	ENSPLAP00000002631	ENSPLAP00000008266	Uncharacterized protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.906
ENSPLAP00000004942	ENSPLAP00000002631	ENSPLAP00000004942	ENSPLAP00000002631	SEC63 domain-containing protein.	Uncharacterized protein.	0.946
ENSPLAP00000004942	ENSPLAP00000011100	ENSPLAP00000004942	ENSPLAP00000011100	SEC63 domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.961
ENSPLAP00000004942	cd2bp2	ENSPLAP00000004942	ENSPLAP00000007093	SEC63 domain-containing protein.	CD2 (cytoplasmic tail) binding protein 2.	0.942
ENSPLAP00000004942	ddx23	ENSPLAP00000004942	ENSPLAP00000021346	SEC63 domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.	0.983
ENSPLAP00000004942	prpf18	ENSPLAP00000004942	ENSPLAP00000027490	SEC63 domain-containing protein.	PRP18 pre-mRNA processing factor 18 homolog (yeast).	0.961
ENSPLAP00000004942	prpf8	ENSPLAP00000004942	ENSPLAP00000029997	SEC63 domain-containing protein.	Pre-mRNA processing factor 8.	0.997
ENSPLAP00000004942	snrnp200	ENSPLAP00000004942	ENSPLAP00000004842	SEC63 domain-containing protein.	Small nuclear ribonucleoprotein 200 (U5).	0.900
ENSPLAP00000004942	snrpd1	ENSPLAP00000004942	ENSPLAP00000004927	SEC63 domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.946