31 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (172 aa)
	ENSPLAP00000027452	Uncharacterized protein. (53 aa)
	RPS19	Ribosomal protein S19. (149 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	LOC106960640	Ribosomal protein S17. (130 aa)
	LOC106942871	Ribosomal protein S19. (147 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC106940296	Uncharacterized protein. (134 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (149 aa)
	LOC106948676	40S ribosomal protein S27-like. (84 aa)
	RPS20	Ribosomal protein S20. (119 aa)
	ENSPLAP00000030343	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	LOC106942607	40S ribosomal protein SA. (307 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	rps3a	Ribosomal protein S3A. (266 aa)
	LOC106954823	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (307 aa)
	LOC106939900	40S ribosomal protein S27. (84 aa)
	RPS29	Ribosomal protein S29. (71 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
	ENSPLAP00000023604	Ribosomal protein S28. (60 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (167 aa)
	LOC106937427	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	ENSPLAP00000017610	Uncharacterized protein. (99 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	mcts1	Malignant T-cell-amplified sequence. (182 aa)
	dhx29	DEAH (Asp-Glu-Ala-His) box polypeptide 29. (986 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000017610	ENSPLAP00000023604	ENSPLAP00000017610	ENSPLAP00000023604	Uncharacterized protein.	Ribosomal protein S28.	0.998
ENSPLAP00000017610	ENSPLAP00000027452	ENSPLAP00000017610	ENSPLAP00000027452	Uncharacterized protein.	Uncharacterized protein.	0.994
ENSPLAP00000017610	ENSPLAP00000030343	ENSPLAP00000017610	ENSPLAP00000030343	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.998
ENSPLAP00000017610	LOC106937427	ENSPLAP00000017610	ENSPLAP00000020965	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.994
ENSPLAP00000017610	LOC106939900	ENSPLAP00000017610	ENSPLAP00000025951	Uncharacterized protein.	40S ribosomal protein S27.	0.970
ENSPLAP00000017610	LOC106940296	ENSPLAP00000017610	ENSPLAP00000003204	Uncharacterized protein.	Uncharacterized protein.	0.998
ENSPLAP00000017610	LOC106942607	ENSPLAP00000017610	ENSPLAP00000027381	Uncharacterized protein.	40S ribosomal protein SA.	0.993
ENSPLAP00000017610	LOC106942871	ENSPLAP00000017610	ENSPLAP00000005637	Uncharacterized protein.	Ribosomal protein S19.	0.994
ENSPLAP00000017610	LOC106948676	ENSPLAP00000017610	ENSPLAP00000031530	Uncharacterized protein.	40S ribosomal protein S27-like.	0.970
ENSPLAP00000017610	LOC106954823	ENSPLAP00000017610	ENSPLAP00000026271	Uncharacterized protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.993
ENSPLAP00000017610	LOC106960640	ENSPLAP00000017610	ENSPLAP00000006712	Uncharacterized protein.	Ribosomal protein S17.	0.991
ENSPLAP00000017610	RPS19	ENSPLAP00000017610	ENSPLAP00000008847	Uncharacterized protein.	Ribosomal protein S19.	0.994
ENSPLAP00000017610	RPS20	ENSPLAP00000017610	ENSPLAP00000031006	Uncharacterized protein.	Ribosomal protein S20.	0.998
ENSPLAP00000017610	RPS29	ENSPLAP00000017610	ENSPLAP00000025239	Uncharacterized protein.	Ribosomal protein S29.	0.994
ENSPLAP00000017610	dhx29	ENSPLAP00000017610	ENSPLAP00000017032	Uncharacterized protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 29.	0.741
ENSPLAP00000017610	fau	ENSPLAP00000017610	ENSPLAP00000005244	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPLAP00000017610	mcts1	ENSPLAP00000017610	ENSPLAP00000016083	Uncharacterized protein.	Malignant T-cell-amplified sequence.	0.634
ENSPLAP00000017610	rps11	ENSPLAP00000017610	ENSPLAP00000009744	Uncharacterized protein.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.998
ENSPLAP00000017610	rps13	ENSPLAP00000017610	ENSPLAP00000028328	Uncharacterized protein.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.998
ENSPLAP00000017610	rps15	ENSPLAP00000017610	ENSPLAP00000023559	Uncharacterized protein.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.998