STRINGSTRING
ubxn7 ubxn7 ENSPLAP00000001591 ENSPLAP00000001591 faf2 faf2 ufd1 ufd1 ubxn1 ubxn1 vcp vcp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubxn7UBX domain protein 7. (526 aa)
ENSPLAP00000001591Zgc:136908; Belongs to the AAA ATPase family. (479 aa)
faf2Fas associated factor family member 2. (445 aa)
ufd1Ubiquitin recognition factor in ER associated degradation 1. (311 aa)
ubxn1UBX domain protein 1. (303 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (806 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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