14 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pllp	Plasmolipin. (161 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (383 aa)
	LOC106958029	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (379 aa)
	ENSPLAP00000029654	Myelin protein zero. (198 aa)
	ENSPLAP00000006846	Myelin basic protein b. (94 aa)
	ENSPLAP00000006853	Uncharacterized protein. (108 aa)
	LOC106955542	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (767 aa)
	ncmap	Uncharacterized protein. (138 aa)
	LOC106946906	Myelin basic protein a. (116 aa)
	LOC106953346	Proteolipid protein 1b. (257 aa)
	PMP22	Peripheral myelin protein 22b. (130 aa)
	prxl2b	Peroxiredoxin like 2B. (201 aa)
	LOC106955541	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (733 aa)
	LOC106965171	Proteolipid protein 1a. (273 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000006846	LOC106946906	ENSPLAP00000006846	ENSPLAP00000013715	Myelin basic protein b.	Myelin basic protein a.	0.408
ENSPLAP00000006846	LOC106953346	ENSPLAP00000006846	ENSPLAP00000018085	Myelin basic protein b.	Proteolipid protein 1b.	0.790
ENSPLAP00000006846	LOC106965171	ENSPLAP00000006846	ENSPLAP00000025108	Myelin basic protein b.	Proteolipid protein 1a.	0.790
ENSPLAP00000006853	LOC106953346	ENSPLAP00000006853	ENSPLAP00000018085	Uncharacterized protein.	Proteolipid protein 1b.	0.534
ENSPLAP00000006853	LOC106965171	ENSPLAP00000006853	ENSPLAP00000025108	Uncharacterized protein.	Proteolipid protein 1a.	0.534
ENSPLAP00000029654	LOC106953346	ENSPLAP00000029654	ENSPLAP00000018085	Myelin protein zero.	Proteolipid protein 1b.	0.516
ENSPLAP00000029654	LOC106965171	ENSPLAP00000029654	ENSPLAP00000025108	Myelin protein zero.	Proteolipid protein 1a.	0.514
ENSPLAP00000029654	pllp	ENSPLAP00000029654	ENSPLAP00000006004	Myelin protein zero.	Plasmolipin.	0.504
LOC106946906	ENSPLAP00000006846	ENSPLAP00000013715	ENSPLAP00000006846	Myelin basic protein a.	Myelin basic protein b.	0.408
LOC106946906	LOC106953346	ENSPLAP00000013715	ENSPLAP00000018085	Myelin basic protein a.	Proteolipid protein 1b.	0.609
LOC106953346	ENSPLAP00000006846	ENSPLAP00000018085	ENSPLAP00000006846	Proteolipid protein 1b.	Myelin basic protein b.	0.790
LOC106953346	ENSPLAP00000006853	ENSPLAP00000018085	ENSPLAP00000006853	Proteolipid protein 1b.	Uncharacterized protein.	0.534
LOC106953346	ENSPLAP00000029654	ENSPLAP00000018085	ENSPLAP00000029654	Proteolipid protein 1b.	Myelin protein zero.	0.516
LOC106953346	LOC106946906	ENSPLAP00000018085	ENSPLAP00000013715	Proteolipid protein 1b.	Myelin basic protein a.	0.609
LOC106955541	LOC106955542	ENSPLAP00000025290	ENSPLAP00000009399	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.908
LOC106955542	LOC106955541	ENSPLAP00000009399	ENSPLAP00000025290	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.908
LOC106965171	ENSPLAP00000006846	ENSPLAP00000025108	ENSPLAP00000006846	Proteolipid protein 1a.	Myelin basic protein b.	0.790
LOC106965171	ENSPLAP00000006853	ENSPLAP00000025108	ENSPLAP00000006853	Proteolipid protein 1a.	Uncharacterized protein.	0.534
LOC106965171	ENSPLAP00000029654	ENSPLAP00000025108	ENSPLAP00000029654	Proteolipid protein 1a.	Myelin protein zero.	0.514
LOC106965171	pllp	ENSPLAP00000025108	ENSPLAP00000006004	Proteolipid protein 1a.	Plasmolipin.	0.567