40 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gpatch1	G patch domain containing 1. (616 aa)
	EFL1	Elongation factor like GTPase 1. (1105 aa)
	mthfsd	Methenyltetrahydrofolate synthetase domain containing. (541 aa)
	srrm1	Serine and arginine repetitive matrix 1. (804 aa)
	snrnp40	Small nuclear ribonucleoprotein 40 (U5). (347 aa)
	LOC106965063	RRM domain-containing protein. (306 aa)
	snw1	SNW domain containing 1. (536 aa)
	dhx35	DEAH-box helicase 35. (699 aa)
	ess2	Ess-2 splicing factor homolog. (475 aa)
	cwc15	CWC15 spliceosome associated protein homolog. (238 aa)
	ppie	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
	ENSPLAP00000026435	Uncharacterized protein. (212 aa)
	wdr83	WD repeat domain containing 83. (323 aa)
	cdc40	Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
	ENSPLAP00000014291	DUF1604 domain-containing protein. (97 aa)
	cactin	Cactin. (852 aa)
	mtrex	Mtr4 exosome RNA helicase. (1036 aa)
	ppil1	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
	ddx23	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (804 aa)
	crnkl1	Crooked neck pre-mRNA splicing factor 1. (769 aa)
	prpf4b	Pre-mRNA processing factor 4Bb. (967 aa)
	eftud2	Elongation factor Tu GTP binding domain containing 2. (971 aa)
	rbmx	RNA binding motif protein X-linked. (383 aa)
	DDX41	DEAD-box helicase 41. (614 aa)
	ppil3	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (171 aa)
	LOC106958723	Serine/arginine repetitive matrix 2. (1294 aa)
	xab2	XPA binding protein 2. (849 aa)
	dhx38	DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1253 aa)
	LOC106942097	Serine/arginine repetitive matrix 1. (804 aa)
	LOC106937515	pre-mRNA-processing factor 17-like. (581 aa)
	cwc22	CWC22 spliceosome associated protein homolog. (1003 aa)
	aqr	Aquarius intron-binding spliceosomal factor. (1468 aa)
	ENSPLAP00000005094	Uncharacterized protein. (110 aa)
	ENSPLAP00000004942	SEC63 domain-containing protein. (153 aa)
	snrnp200	Small nuclear ribonucleoprotein 200 (U5). (1841 aa)
	rbm22	RNA binding motif protein 22. (426 aa)
	ppwd1	Peptidylprolyl isomerase domain and WD repeat containing 1. (667 aa)
	LOC106953185	RRM domain-containing protein. (321 aa)
	sart3	Spliceosome associated factor 3, U4/U6 recycling protein. (945 aa)
	LOC106940424	WD_REPEATS_REGION domain-containing protein. (228 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	ENSPLAP00000014291	ENSPLAP00000008585	ENSPLAP00000014291	DEAD-box helicase 41.	DUF1604 domain-containing protein.	0.649
DDX41	ENSPLAP00000026435	ENSPLAP00000008585	ENSPLAP00000026435	DEAD-box helicase 41.	Uncharacterized protein.	0.668
DDX41	LOC106937515	ENSPLAP00000008585	ENSPLAP00000017348	DEAD-box helicase 41.	pre-mRNA-processing factor 17-like.	0.704
DDX41	LOC106940424	ENSPLAP00000008585	ENSPLAP00000001485	DEAD-box helicase 41.	WD_REPEATS_REGION domain-containing protein.	0.668
DDX41	LOC106942097	ENSPLAP00000008585	ENSPLAP00000019705	DEAD-box helicase 41.	Serine/arginine repetitive matrix 1.	0.704
DDX41	cdc40	ENSPLAP00000008585	ENSPLAP00000012863	DEAD-box helicase 41.	Cell division cycle 40 homolog (S. cerevisiae).	0.704
DDX41	cwc22	ENSPLAP00000008585	ENSPLAP00000017054	DEAD-box helicase 41.	CWC22 spliceosome associated protein homolog.	0.742
DDX41	ddx23	ENSPLAP00000008585	ENSPLAP00000021346	DEAD-box helicase 41.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.	0.629
DDX41	dhx35	ENSPLAP00000008585	ENSPLAP00000031595	DEAD-box helicase 41.	DEAH-box helicase 35.	0.774
DDX41	dhx38	ENSPLAP00000008585	ENSPLAP00000020770	DEAD-box helicase 41.	DEAH (Asp-Glu-Ala-His) box polypeptide 38.	0.780
DDX41	gpatch1	ENSPLAP00000008585	ENSPLAP00000001057	DEAD-box helicase 41.	G patch domain containing 1.	0.649
DDX41	mtrex	ENSPLAP00000008585	ENSPLAP00000016808	DEAD-box helicase 41.	Mtr4 exosome RNA helicase.	0.744
DDX41	ppie	ENSPLAP00000008585	ENSPLAP00000024223	DEAD-box helicase 41.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.616
DDX41	ppil1	ENSPLAP00000008585	ENSPLAP00000028222	DEAD-box helicase 41.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.719
DDX41	ppil3	ENSPLAP00000008585	ENSPLAP00000021993	DEAD-box helicase 41.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.678
DDX41	ppwd1	ENSPLAP00000008585	ENSPLAP00000003745	DEAD-box helicase 41.	Peptidylprolyl isomerase domain and WD repeat containing 1.	0.878
DDX41	srrm1	ENSPLAP00000008585	ENSPLAP00000022314	DEAD-box helicase 41.	Serine and arginine repetitive matrix 1.	0.704
EFL1	ENSPLAP00000004942	ENSPLAP00000001025	ENSPLAP00000004942	Elongation factor like GTPase 1.	SEC63 domain-containing protein.	0.851
EFL1	ENSPLAP00000014291	ENSPLAP00000001025	ENSPLAP00000014291	Elongation factor like GTPase 1.	DUF1604 domain-containing protein.	0.417
EFL1	ENSPLAP00000026435	ENSPLAP00000001025	ENSPLAP00000026435	Elongation factor like GTPase 1.	Uncharacterized protein.	0.681