(24 nodes) Rhodanese-like domain network (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106964604	Thiosulfate sulfurtransferase. (317 aa)
	dusp8	Dual specificity phosphatase 8a. (680 aa)
	LOC106944642	Si:ch211-161h7.8. (172 aa)
	LOC106944943	Rhodanese domain-containing protein. (117 aa)
	tstd1	Rhodanese domain-containing protein. (115 aa)
	styxl1	Serine/threonine/tyrosine interacting-like 1. (287 aa)
	dusp6	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	dusp1	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	dusp5	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	cep41	Centrosomal protein 41. (368 aa)
	LOC106937755	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (366 aa)
	tbck	TBC1 domain containing kinase. (887 aa)
	LOC106952546	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (367 aa)
	dusp16	Dual specificity phosphatase 16. (631 aa)
	LOC106936506	Si:dkey-165n16.1. (170 aa)
	LOC106936811	Sulfurtransferase. (292 aa)
	LOC106948589	Dual specificity phosphatase 2. (315 aa)
	dusp7	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (369 aa)
	LOC106964605	Sulfurtransferase. (294 aa)
	mocs3	Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] (450 aa)
	tbc1d23	TBC1 domain family, member 23. (680 aa)
	CDC25B	Cell division cycle 25B. (519 aa)
	TSTD2	Thiosulfate sulfurtransferase like domain containing 2. (465 aa)
	dusp10	Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106936506	LOC106936811	ENSPLAP00000002456	ENSPLAP00000002208	Si:dkey-165n16.1.	Sulfurtransferase.	0.652
LOC106936506	LOC106964604	ENSPLAP00000002456	ENSPLAP00000022385	Si:dkey-165n16.1.	Thiosulfate sulfurtransferase.	0.652
LOC106936506	LOC106964605	ENSPLAP00000002456	ENSPLAP00000022387	Si:dkey-165n16.1.	Sulfurtransferase.	0.652
LOC106936506	mocs3	ENSPLAP00000002456	ENSPLAP00000028804	Si:dkey-165n16.1.	Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]	0.632
LOC106936811	LOC106936506	ENSPLAP00000002208	ENSPLAP00000002456	Sulfurtransferase.	Si:dkey-165n16.1.	0.652
LOC106936811	LOC106944642	ENSPLAP00000002208	ENSPLAP00000019933	Sulfurtransferase.	Si:ch211-161h7.8.	0.652
LOC106936811	LOC106944943	ENSPLAP00000002208	ENSPLAP00000018481	Sulfurtransferase.	Rhodanese domain-containing protein.	0.651
LOC106936811	LOC106964604	ENSPLAP00000002208	ENSPLAP00000022385	Sulfurtransferase.	Thiosulfate sulfurtransferase.	0.876
LOC106936811	LOC106964605	ENSPLAP00000002208	ENSPLAP00000022387	Sulfurtransferase.	Sulfurtransferase.	0.877
LOC106936811	mocs3	ENSPLAP00000002208	ENSPLAP00000028804	Sulfurtransferase.	Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...]	0.943
LOC106936811	tstd1	ENSPLAP00000002208	ENSPLAP00000018471	Sulfurtransferase.	Rhodanese domain-containing protein.	0.651
LOC106937755	LOC106948589	ENSPLAP00000006374	ENSPLAP00000001291	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity phosphatase 2.	0.498
LOC106937755	LOC106952546	ENSPLAP00000006374	ENSPLAP00000002982	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.498
LOC106937755	dusp1	ENSPLAP00000006374	ENSPLAP00000008747	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.517
LOC106937755	dusp10	ENSPLAP00000006374	ENSPLAP00000029713	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.523
LOC106937755	dusp16	ENSPLAP00000006374	ENSPLAP00000002508	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity phosphatase 16.	0.523
LOC106937755	dusp5	ENSPLAP00000006374	ENSPLAP00000008086	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.498
LOC106937755	dusp8	ENSPLAP00000006374	ENSPLAP00000021600	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity phosphatase 8a.	0.523
LOC106944642	LOC106936811	ENSPLAP00000019933	ENSPLAP00000002208	Si:ch211-161h7.8.	Sulfurtransferase.	0.652
LOC106944642	LOC106964604	ENSPLAP00000019933	ENSPLAP00000022385	Si:ch211-161h7.8.	Thiosulfate sulfurtransferase.	0.652