(40 nodes) Mitochondrial carrier protein network (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	slc25a33	Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family. (313 aa)
	LOC106937915	Solute carrier family 25 member 55a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (332 aa)
	LOC106963221	Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family. (338 aa)
	LOC106963068	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (334 aa)
	slc25a16	Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family. (321 aa)
	LOC106940436	Solute carrier family 25 member 14; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	LOC106951214	Solute carrier family 25 member 44a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (317 aa)
	slc25a48	Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)
	LOC106935851	Solute carrier family 25 member 36b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	slc25a25	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (471 aa)
	LOC106960584	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (468 aa)
	SLC25A42	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family. (335 aa)
	slc25a17	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	slc25a47	Solute carrier family 25 member 47a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (303 aa)
	LOC106955538	Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (304 aa)
	slc25a19	Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family. (322 aa)
	LOC106940761	Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family. (280 aa)
	SLC25A12	Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (673 aa)
	LOC106944757	Solute carrier family 25 member 24, like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (450 aa)
	slc25a1	Slc25a1 solute carrier family 25 member 1b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (318 aa)
	SLC25A36	Solute carrier family 25 member 36; Belongs to the mitochondrial carrier (TC 2.A.29) family. (321 aa)
	slc25a40	Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)
	slc25a43	Solute carrier family 25 member 43; Belongs to the mitochondrial carrier (TC 2.A.29) family. (345 aa)
	LOC106965212	Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family. (299 aa)
	LOC106936494	Solute carrier family 25 member 22a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	LOC106960517	Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)
	ENSPLAP00000009522	Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (288 aa)
	LOC106937075	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (493 aa)
	slc25a4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	LOC106954824	Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix. Required during erythropoiesis. Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (285 aa)
	SLC25A29	Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (305 aa)
	LOC106962422	Solute carrier family 25 member 39; Belongs to the mitochondrial carrier (TC 2.A.29) family. (358 aa)
	LOC106954196	Solute carrier family 25 member 55a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (331 aa)
	LOC106946949	Solute carrier family 25 member 12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (683 aa)
	LOC106954186	Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family. (331 aa)
	LOC106936259	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (364 aa)
	LOC106956192	Solute carrier family 25 member 25b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (547 aa)
	SLC25A45	Solute carrier family 25 member 45; Belongs to the mitochondrial carrier (TC 2.A.29) family. (285 aa)
	slc25a24	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (475 aa)
	LOC106959940	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106936259	LOC106959940	ENSPLAP00000013483	ENSPLAP00000019793	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.667
LOC106936259	LOC106965212	ENSPLAP00000013483	ENSPLAP00000008616	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.667
LOC106936259	slc25a4	ENSPLAP00000013483	ENSPLAP00000010851	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.667
LOC106937075	LOC106959940	ENSPLAP00000010336	ENSPLAP00000019793	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106937075	LOC106965212	ENSPLAP00000010336	ENSPLAP00000008616	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106937075	slc25a4	ENSPLAP00000010336	ENSPLAP00000010851	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106944757	LOC106959940	ENSPLAP00000030263	ENSPLAP00000019793	Solute carrier family 25 member 24, like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106944757	LOC106965212	ENSPLAP00000030263	ENSPLAP00000008616	Solute carrier family 25 member 24, like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106944757	slc25a4	ENSPLAP00000030263	ENSPLAP00000010851	Solute carrier family 25 member 24, like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106956192	LOC106959940	ENSPLAP00000014801	ENSPLAP00000019793	Solute carrier family 25 member 25b; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106956192	LOC106965212	ENSPLAP00000014801	ENSPLAP00000008616	Solute carrier family 25 member 25b; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106956192	slc25a4	ENSPLAP00000014801	ENSPLAP00000010851	Solute carrier family 25 member 25b; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106959940	LOC106936259	ENSPLAP00000019793	ENSPLAP00000013483	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.667
LOC106959940	LOC106937075	ENSPLAP00000019793	ENSPLAP00000010336	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106959940	LOC106944757	ENSPLAP00000019793	ENSPLAP00000030263	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 24, like; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106959940	LOC106956192	ENSPLAP00000019793	ENSPLAP00000014801	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 25b; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106959940	LOC106960584	ENSPLAP00000019793	ENSPLAP00000024528	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511
LOC106959940	LOC106965212	ENSPLAP00000019793	ENSPLAP00000008616	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.701
LOC106959940	slc25a1	ENSPLAP00000019793	ENSPLAP00000030500	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Slc25a1 solute carrier family 25 member 1b; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.667
LOC106959940	slc25a24	ENSPLAP00000019793	ENSPLAP00000019061	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.511