(4 nodes) Transcription initiation factor TFIID component TAF4, C-terminal network (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPLAP00000016416	TAF4 domain-containing protein. (283 aa)
	LOC106938892	Si:dkey-219c3.2. (921 aa)
	LOC106953272	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (818 aa)
	TAF4	TATA-box binding protein associated factor 4. (856 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000016416	LOC106953272	ENSPLAP00000016416	ENSPLAP00000001419	TAF4 domain-containing protein.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.927
ENSPLAP00000016416	TAF4	ENSPLAP00000016416	ENSPLAP00000021753	TAF4 domain-containing protein.	TATA-box binding protein associated factor 4.	0.731
LOC106938892	LOC106953272	ENSPLAP00000002977	ENSPLAP00000001419	Si:dkey-219c3.2.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.919
LOC106938892	TAF4	ENSPLAP00000002977	ENSPLAP00000021753	Si:dkey-219c3.2.	TATA-box binding protein associated factor 4.	0.900
LOC106953272	ENSPLAP00000016416	ENSPLAP00000001419	ENSPLAP00000016416	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4 domain-containing protein.	0.927
LOC106953272	LOC106938892	ENSPLAP00000001419	ENSPLAP00000002977	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Si:dkey-219c3.2.	0.919
LOC106953272	TAF4	ENSPLAP00000001419	ENSPLAP00000021753	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA-box binding protein associated factor 4.	0.925
TAF4	ENSPLAP00000016416	ENSPLAP00000021753	ENSPLAP00000016416	TATA-box binding protein associated factor 4.	TAF4 domain-containing protein.	0.731
TAF4	LOC106938892	ENSPLAP00000021753	ENSPLAP00000002977	TATA-box binding protein associated factor 4.	Si:dkey-219c3.2.	0.900
TAF4	LOC106953272	ENSPLAP00000021753	ENSPLAP00000001419	TATA-box binding protein associated factor 4.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.925