7 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106963594	MOB kinase activator 1Bb. (217 aa)
	LOC106961886	MOB kinase activator 1A. (219 aa)
	MOB3A	MOB kinase activator 3A. (216 aa)
	mob3c	MOB kinase activator 3C. (216 aa)
	mob2	MOB kinase activator 2a. (300 aa)
	LOC106954924	Si:dkey-266m15.5. (227 aa)
	LOC106950570	MOB family member 4, phocein. (226 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106950570	LOC106954924	ENSPLAP00000001095	ENSPLAP00000025159	MOB family member 4, phocein.	Si:dkey-266m15.5.	0.414
LOC106950570	LOC106961886	ENSPLAP00000001095	ENSPLAP00000023109	MOB family member 4, phocein.	MOB kinase activator 1A.	0.414
LOC106954924	LOC106950570	ENSPLAP00000025159	ENSPLAP00000001095	Si:dkey-266m15.5.	MOB family member 4, phocein.	0.414
LOC106954924	LOC106963594	ENSPLAP00000025159	ENSPLAP00000014902	Si:dkey-266m15.5.	MOB kinase activator 1Bb.	0.883
LOC106954924	mob2	ENSPLAP00000025159	ENSPLAP00000021612	Si:dkey-266m15.5.	MOB kinase activator 2a.	0.582
LOC106961886	LOC106950570	ENSPLAP00000023109	ENSPLAP00000001095	MOB kinase activator 1A.	MOB family member 4, phocein.	0.414
LOC106961886	LOC106963594	ENSPLAP00000023109	ENSPLAP00000014902	MOB kinase activator 1A.	MOB kinase activator 1Bb.	0.943
LOC106961886	mob2	ENSPLAP00000023109	ENSPLAP00000021612	MOB kinase activator 1A.	MOB kinase activator 2a.	0.578
LOC106963594	LOC106954924	ENSPLAP00000014902	ENSPLAP00000025159	MOB kinase activator 1Bb.	Si:dkey-266m15.5.	0.883
LOC106963594	LOC106961886	ENSPLAP00000014902	ENSPLAP00000023109	MOB kinase activator 1Bb.	MOB kinase activator 1A.	0.943
mob2	LOC106954924	ENSPLAP00000021612	ENSPLAP00000025159	MOB kinase activator 2a.	Si:dkey-266m15.5.	0.582
mob2	LOC106961886	ENSPLAP00000021612	ENSPLAP00000023109	MOB kinase activator 2a.	MOB kinase activator 1A.	0.578