(7 nodes) TAFH/NHR1 domain superfamily network (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cbfa2t2	CBFA2/RUNX1 partner transcriptional co-repressor 2. (595 aa)
	LOC106953272	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (818 aa)
	LOC106938892	Si:dkey-219c3.2. (921 aa)
	LOC106957710	TAFH domain-containing protein. (692 aa)
	runx1t1	RUNX1 partner transcriptional co-repressor 1. (558 aa)
	cbfa2t3	CBFA2/RUNX1 partner transcriptional co-repressor 3. (645 aa)
	TAF4	TATA-box binding protein associated factor 4. (856 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106938892	LOC106953272	ENSPLAP00000002977	ENSPLAP00000001419	Si:dkey-219c3.2.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.919
LOC106938892	TAF4	ENSPLAP00000002977	ENSPLAP00000021753	Si:dkey-219c3.2.	TATA-box binding protein associated factor 4.	0.900
LOC106953272	LOC106938892	ENSPLAP00000001419	ENSPLAP00000002977	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Si:dkey-219c3.2.	0.919
LOC106953272	LOC106957710	ENSPLAP00000001419	ENSPLAP00000009314	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAFH domain-containing protein.	0.899
LOC106953272	TAF4	ENSPLAP00000001419	ENSPLAP00000021753	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA-box binding protein associated factor 4.	0.925
LOC106957710	LOC106953272	ENSPLAP00000009314	ENSPLAP00000001419	TAFH domain-containing protein.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.899
LOC106957710	TAF4	ENSPLAP00000009314	ENSPLAP00000021753	TAFH domain-containing protein.	TATA-box binding protein associated factor 4.	0.731
TAF4	LOC106938892	ENSPLAP00000021753	ENSPLAP00000002977	TATA-box binding protein associated factor 4.	Si:dkey-219c3.2.	0.900
TAF4	LOC106953272	ENSPLAP00000021753	ENSPLAP00000001419	TATA-box binding protein associated factor 4.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.925
TAF4	LOC106957710	ENSPLAP00000021753	ENSPLAP00000009314	TATA-box binding protein associated factor 4.	TAFH domain-containing protein.	0.731
cbfa2t2	cbfa2t3	ENSPLAP00000020505	ENSPLAP00000014695	CBFA2/RUNX1 partner transcriptional co-repressor 2.	CBFA2/RUNX1 partner transcriptional co-repressor 3.	0.651
cbfa2t2	runx1t1	ENSPLAP00000020505	ENSPLAP00000014153	CBFA2/RUNX1 partner transcriptional co-repressor 2.	RUNX1 partner transcriptional co-repressor 1.	0.649
cbfa2t3	cbfa2t2	ENSPLAP00000014695	ENSPLAP00000020505	CBFA2/RUNX1 partner transcriptional co-repressor 3.	CBFA2/RUNX1 partner transcriptional co-repressor 2.	0.651
runx1t1	cbfa2t2	ENSPLAP00000014153	ENSPLAP00000020505	RUNX1 partner transcriptional co-repressor 1.	CBFA2/RUNX1 partner transcriptional co-repressor 2.	0.649