13 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPLAP00000028044	Uncharacterized protein. (258 aa)
	LOC106963330	Notch receptor 1a. (2447 aa)
	ENSPLAP00000006957	Uncharacterized protein. (664 aa)
	ENSPLAP00000007092	Uncharacterized protein. (237 aa)
	lfng	Beta-1,3-N-acetylglucosaminyltransferase. (370 aa)
	LOC106936426	Beta-1,3-N-acetylglucosaminyltransferase. (387 aa)
	LOC106947024	Uncharacterized protein. (1469 aa)
	tmed2	Transmembrane p24 trafficking protein 2. (201 aa)
	ENSPLAP00000023748	Uncharacterized protein. (110 aa)
	LOC106957747	Beta-1,3-N-acetylglucosaminyltransferase. (338 aa)
	LOC106934995	Crumbs cell polarity complex component 1. (1313 aa)
	LOC106959700	Crumbs cell polarity complex component 2b. (1434 aa)
	LOC106954293	Notch receptor 1b. (2443 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000006957	LOC106936426	ENSPLAP00000006957	ENSPLAP00000010170	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000006957	LOC106954293	ENSPLAP00000006957	ENSPLAP00000025395	Uncharacterized protein.	Notch receptor 1b.	0.465
ENSPLAP00000006957	LOC106957747	ENSPLAP00000006957	ENSPLAP00000024775	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000006957	LOC106963330	ENSPLAP00000006957	ENSPLAP00000001986	Uncharacterized protein.	Notch receptor 1a.	0.465
ENSPLAP00000006957	lfng	ENSPLAP00000006957	ENSPLAP00000009761	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000007092	LOC106936426	ENSPLAP00000007092	ENSPLAP00000010170	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000007092	LOC106954293	ENSPLAP00000007092	ENSPLAP00000025395	Uncharacterized protein.	Notch receptor 1b.	0.465
ENSPLAP00000007092	LOC106957747	ENSPLAP00000007092	ENSPLAP00000024775	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000007092	LOC106963330	ENSPLAP00000007092	ENSPLAP00000001986	Uncharacterized protein.	Notch receptor 1a.	0.465
ENSPLAP00000007092	lfng	ENSPLAP00000007092	ENSPLAP00000009761	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000023748	LOC106936426	ENSPLAP00000023748	ENSPLAP00000010170	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000023748	LOC106954293	ENSPLAP00000023748	ENSPLAP00000025395	Uncharacterized protein.	Notch receptor 1b.	0.465
ENSPLAP00000023748	LOC106957747	ENSPLAP00000023748	ENSPLAP00000024775	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000023748	LOC106963330	ENSPLAP00000023748	ENSPLAP00000001986	Uncharacterized protein.	Notch receptor 1a.	0.465
ENSPLAP00000023748	lfng	ENSPLAP00000023748	ENSPLAP00000009761	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.501
ENSPLAP00000028044	LOC106936426	ENSPLAP00000028044	ENSPLAP00000010170	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.623
ENSPLAP00000028044	LOC106954293	ENSPLAP00000028044	ENSPLAP00000025395	Uncharacterized protein.	Notch receptor 1b.	0.668
ENSPLAP00000028044	LOC106957747	ENSPLAP00000028044	ENSPLAP00000024775	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.623
ENSPLAP00000028044	LOC106963330	ENSPLAP00000028044	ENSPLAP00000001986	Uncharacterized protein.	Notch receptor 1a.	0.668
ENSPLAP00000028044	lfng	ENSPLAP00000028044	ENSPLAP00000009761	Uncharacterized protein.	Beta-1,3-N-acetylglucosaminyltransferase.	0.623