50 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPLAP00000000084	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	snupn	Snurportin 1. (376 aa)
	rae1	Ribonucleic acid export 1. (368 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (518 aa)
	ENSPLAP00000002631	Uncharacterized protein. (75 aa)
	nup43	Nucleoporin 43. (370 aa)
	nup155	Nucleoporin 155. (1365 aa)
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	gemin4	Gem (nuclear organelle) associated protein 4. (1117 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
	gemin8	Gem (nuclear organelle) associated protein 8. (197 aa)
	nup50	Nucleoporin 50. (449 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	ddx20	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (773 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	ENSPLAP00000009558	Uncharacterized protein. (293 aa)
	ranbp2	RAN binding protein 2. (3056 aa)
	nup188	Nucleoporin 188. (1727 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (658 aa)
	ENSPLAP00000011100	Small nuclear ribonucleoprotein-associated protein. (230 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	WDR77	WD repeat domain 77. (334 aa)
	nup214	Nup214_FG domain-containing protein. (2007 aa)
	nup160	Nucleoporin 160. (1397 aa)
	nup210	Nucleoporin 210. (1880 aa)
	LOC106943238	WD_REPEATS_REGION domain-containing protein. (1186 aa)
	nup88	Nucleoporin 88. (713 aa)
	nup133	Nucleoporin 133. (759 aa)
	nup37	Nucleoporin 37. (347 aa)
	LOC106945352	Nucleoporin 42. (420 aa)
	ndc1	NDC1 transmembrane nucleoporin. (669 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	nup98	Nucleoporin 98. (1821 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
	LOC106941750	Survival of motor neuron 1, telomeric. (283 aa)
	NUP54	Nucleoporin 54. (620 aa)
	ENSPLAP00000026852	RanBP2-type domain-containing protein. (68 aa)
	nup58	Nucleoporin 58. (594 aa)
	NUP62	Nucleoporin 62. (553 aa)
	prmt5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (631 aa)
	LOC106942475	Gem (nuclear organelle) associated protein 5. (1479 aa)
	LOC106942356	Gem-associated protein 5-like. (1479 aa)
	gemin7	Gem (nuclear organelle) associated protein 7. (128 aa)
	gemin2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	LOC106960064	Translocated promoter region b, nuclear basket protein. (1692 aa)
	tpr	Translocated promoter region a, nuclear basket protein. (2076 aa)
	clns1a	Chloride channel, nucleotide-sensitive, 1A. (250 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000084	ENSPLAP00000002631	ENSPLAP00000000084	ENSPLAP00000002631	Small nuclear ribonucleoprotein polypeptide F.	Uncharacterized protein.	0.999
ENSPLAP00000000084	ENSPLAP00000011100	ENSPLAP00000000084	ENSPLAP00000011100	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein-associated protein.	0.997
ENSPLAP00000000084	LOC106941750	ENSPLAP00000000084	ENSPLAP00000025219	Small nuclear ribonucleoprotein polypeptide F.	Survival of motor neuron 1, telomeric.	0.973
ENSPLAP00000000084	LOC106942356	ENSPLAP00000000084	ENSPLAP00000029343	Small nuclear ribonucleoprotein polypeptide F.	Gem-associated protein 5-like.	0.746
ENSPLAP00000000084	LOC106942475	ENSPLAP00000000084	ENSPLAP00000028622	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 5.	0.746
ENSPLAP00000000084	LOC106943238	ENSPLAP00000000084	ENSPLAP00000016148	Small nuclear ribonucleoprotein polypeptide F.	WD_REPEATS_REGION domain-containing protein.	0.746
ENSPLAP00000000084	LOC106945352	ENSPLAP00000000084	ENSPLAP00000017864	Small nuclear ribonucleoprotein polypeptide F.	Nucleoporin 42.	0.630
ENSPLAP00000000084	LOC106960064	ENSPLAP00000000084	ENSPLAP00000031148	Small nuclear ribonucleoprotein polypeptide F.	Translocated promoter region b, nuclear basket protein.	0.612
ENSPLAP00000000084	NUP54	ENSPLAP00000000084	ENSPLAP00000025598	Small nuclear ribonucleoprotein polypeptide F.	Nucleoporin 54.	0.601
ENSPLAP00000000084	WDR77	ENSPLAP00000000084	ENSPLAP00000011931	Small nuclear ribonucleoprotein polypeptide F.	WD repeat domain 77.	0.663
ENSPLAP00000000084	clns1a	ENSPLAP00000000084	ENSPLAP00000031264	Small nuclear ribonucleoprotein polypeptide F.	Chloride channel, nucleotide-sensitive, 1A.	0.955
ENSPLAP00000000084	ddx20	ENSPLAP00000000084	ENSPLAP00000007523	Small nuclear ribonucleoprotein polypeptide F.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.891
ENSPLAP00000000084	gemin2	ENSPLAP00000000084	ENSPLAP00000029762	Small nuclear ribonucleoprotein polypeptide F.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.984
ENSPLAP00000000084	gemin4	ENSPLAP00000000084	ENSPLAP00000004605	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 4.	0.811
ENSPLAP00000000084	gemin7	ENSPLAP00000000084	ENSPLAP00000029736	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 7.	0.661
ENSPLAP00000000084	gemin8	ENSPLAP00000000084	ENSPLAP00000004934	Small nuclear ribonucleoprotein polypeptide F.	Gem (nuclear organelle) associated protein 8.	0.842
ENSPLAP00000000084	ndc1	ENSPLAP00000000084	ENSPLAP00000018567	Small nuclear ribonucleoprotein polypeptide F.	NDC1 transmembrane nucleoporin.	0.603
ENSPLAP00000000084	nup107	ENSPLAP00000000084	ENSPLAP00000021341	Small nuclear ribonucleoprotein polypeptide F.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.626
ENSPLAP00000000084	nup133	ENSPLAP00000000084	ENSPLAP00000016575	Small nuclear ribonucleoprotein polypeptide F.	Nucleoporin 133.	0.626
ENSPLAP00000000084	nup210	ENSPLAP00000000084	ENSPLAP00000016091	Small nuclear ribonucleoprotein polypeptide F.	Nucleoporin 210.	0.628