28 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106953928	Chondroitin sulfate proteoglycan 5b. (619 aa)
	LOC106957322	Hyaluronidase. (460 aa)
	fras1	Fraser extracellular matrix complex subunit 1. (3698 aa)
	LOC106959479	Beta-hexosaminidase. (520 aa)
	ncan	Neurocan b. (1341 aa)
	hexb	Beta-hexosaminidase. (548 aa)
	vcan	Versican a. (546 aa)
	LOC106961845	Decorin; May affect the rate of fibrils formation. (360 aa)
	ENSPLAP00000019612	Uncharacterized protein. (645 aa)
	LOC106935221	Uncharacterized protein. (1239 aa)
	ENSPLAP00000018127	Brevican. (863 aa)
	LOC106963521	Family with sequence similarity 149 member B1. (676 aa)
	LOC106936884	Si:dkey-193c22.2. (2407 aa)
	LOC106937593	Hyaluronidase. (441 aa)
	LOC106957509	Fras1 related extracellular matrix 1b. (1507 aa)
	frem1	Fras1 related extracellular matrix 1a. (961 aa)
	LOC106956350	Hyaluronidase. (440 aa)
	idua	Iduronidase alpha-L-. (590 aa)
	bgn	Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. (372 aa)
	ENSPLAP00000010188	Hyaluronidase. (485 aa)
	cspg5	Chondroitin sulfate proteoglycan 5a. (516 aa)
	ENSPLAP00000009956	Sulfatase domain-containing protein. (107 aa)
	LOC106934968	Family with sequence similarity 149 member B1. (699 aa)
	ARSB	Arylsulfatase B. (483 aa)
	LOC106958757	Uncharacterized protein. (1658 aa)
	LOC106957893	Uncharacterized protein. (2375 aa)
	ids	Iduronate 2-sulfatase. (562 aa)
	cspg4	Chondroitin sulfate proteoglycan 4. (2266 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARSB	ENSPLAP00000009956	ENSPLAP00000009433	ENSPLAP00000009956	Arylsulfatase B.	Sulfatase domain-containing protein.	0.538
ARSB	ENSPLAP00000010188	ENSPLAP00000009433	ENSPLAP00000010188	Arylsulfatase B.	Hyaluronidase.	0.895
ARSB	LOC106934968	ENSPLAP00000009433	ENSPLAP00000009670	Arylsulfatase B.	Family with sequence similarity 149 member B1.	0.461
ARSB	LOC106937593	ENSPLAP00000009433	ENSPLAP00000014864	Arylsulfatase B.	Hyaluronidase.	0.896
ARSB	LOC106956350	ENSPLAP00000009433	ENSPLAP00000011339	Arylsulfatase B.	Hyaluronidase.	0.849
ARSB	LOC106957322	ENSPLAP00000009433	ENSPLAP00000030906	Arylsulfatase B.	Hyaluronidase.	0.896
ARSB	LOC106959479	ENSPLAP00000009433	ENSPLAP00000028754	Arylsulfatase B.	Beta-hexosaminidase.	0.489
ARSB	LOC106963521	ENSPLAP00000009433	ENSPLAP00000016372	Arylsulfatase B.	Family with sequence similarity 149 member B1.	0.461
ARSB	hexb	ENSPLAP00000009433	ENSPLAP00000026744	Arylsulfatase B.	Beta-hexosaminidase.	0.489
ARSB	ids	ENSPLAP00000009433	ENSPLAP00000003496	Arylsulfatase B.	Iduronate 2-sulfatase.	0.597
ARSB	idua	ENSPLAP00000009433	ENSPLAP00000011316	Arylsulfatase B.	Iduronidase alpha-L-.	0.920
ENSPLAP00000009956	ARSB	ENSPLAP00000009956	ENSPLAP00000009433	Sulfatase domain-containing protein.	Arylsulfatase B.	0.538
ENSPLAP00000009956	ENSPLAP00000010188	ENSPLAP00000009956	ENSPLAP00000010188	Sulfatase domain-containing protein.	Hyaluronidase.	0.895
ENSPLAP00000009956	LOC106934968	ENSPLAP00000009956	ENSPLAP00000009670	Sulfatase domain-containing protein.	Family with sequence similarity 149 member B1.	0.461
ENSPLAP00000009956	LOC106937593	ENSPLAP00000009956	ENSPLAP00000014864	Sulfatase domain-containing protein.	Hyaluronidase.	0.896
ENSPLAP00000009956	LOC106956350	ENSPLAP00000009956	ENSPLAP00000011339	Sulfatase domain-containing protein.	Hyaluronidase.	0.849
ENSPLAP00000009956	LOC106957322	ENSPLAP00000009956	ENSPLAP00000030906	Sulfatase domain-containing protein.	Hyaluronidase.	0.896
ENSPLAP00000009956	LOC106959479	ENSPLAP00000009956	ENSPLAP00000028754	Sulfatase domain-containing protein.	Beta-hexosaminidase.	0.489
ENSPLAP00000009956	LOC106963521	ENSPLAP00000009956	ENSPLAP00000016372	Sulfatase domain-containing protein.	Family with sequence similarity 149 member B1.	0.461
ENSPLAP00000009956	hexb	ENSPLAP00000009956	ENSPLAP00000026744	Sulfatase domain-containing protein.	Beta-hexosaminidase.	0.489