49 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPLAP00000006347	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (281 aa)
	LOC106959835	Uncharacterized protein. (877 aa)
	LOC106964583	Glutamate receptor, ionotropic, AMPA 1a. (598 aa)
	LOC106955742	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1139 aa)
	ENSPLAP00000004498	Protein kinase domain-containing protein. (312 aa)
	LOC106963969	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1645 aa)
	ENSPLAP00000002780	Uncharacterized protein. (117 aa)
	nefm	Neurofilament, medium polypeptide a; Belongs to the intermediate filament family. (902 aa)
	nefh	IF rod domain-containing protein; Belongs to the intermediate filament family. (741 aa)
	camk2a	Calcium/calmodulin-dependent protein kinase II alpha; Belongs to the protein kinase superfamily. (469 aa)
	ENSPLAP00000000716	Uncharacterized protein. (143 aa)
	ina	Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family. (478 aa)
	LOC106952755	Uncharacterized protein; Belongs to the MAGUK family. (875 aa)
	ENSPLAP00000016075	Uncharacterized protein. (95 aa)
	LOC106936764	Uncharacterized protein. (786 aa)
	LOC106958643	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (446 aa)
	dlg4	Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family. (707 aa)
	LOC106952556	Neurofilament, light polypeptide a; Belongs to the intermediate filament family. (601 aa)
	LOC106954491	Uncharacterized protein. (858 aa)
	ENSPLAP00000022549	Uncharacterized protein. (79 aa)
	LOC106962579	Uncharacterized protein. (1438 aa)
	ENSPLAP00000023785	ANF_receptor domain-containing protein. (306 aa)
	grin2a	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a. (1532 aa)
	LOC106952308	Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b. (1652 aa)
	GRIA2	Glutamate ionotropic receptor AMPA type subunit 2. (806 aa)
	nefl	Neurofilament, light polypeptide b; Belongs to the intermediate filament family. (566 aa)
	lrrc7	Leucine rich repeat containing 7. (1434 aa)
	ENSPLAP00000014622	PDZ domain-containing protein. (120 aa)
	camk2b	Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2. (510 aa)
	ENSPLAP00000013254	SH3 domain-containing protein. (138 aa)
	ENSPLAP00000013180	PDZ domain-containing protein. (108 aa)
	ENSPLAP00000013170	Uncharacterized protein. (240 aa)
	GRIN2B	Glutamate ionotropic receptor NMDA type subunit 2B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1260 aa)
	LOC106952073	IF rod domain-containing protein; Belongs to the intermediate filament family. (456 aa)
	ENSPLAP00000012518	CaMKII_AD domain-containing protein. (171 aa)
	LOC106955966	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (474 aa)
	ENSPLAP00000031123	Uncharacterized protein. (151 aa)
	dlg1	Uncharacterized protein. (765 aa)
	LOC106959359	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (459 aa)
	ENSPLAP00000029743	Uncharacterized protein. (158 aa)
	ENSPLAP00000028832	CaMKII_AD domain-containing protein. (187 aa)
	ENSPLAP00000028739	Discs, large homolog 4b (Drosophila). (315 aa)
	ENSPLAP00000027784	Discs, large homolog 3 (Drosophila). (366 aa)
	LOC106957590	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1123 aa)
	LOC106938978	Uncharacterized protein. (628 aa)
	LOC106954765	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1620 aa)
	grin1	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a. (883 aa)
	LOC106947084	Uncharacterized protein. (884 aa)
	ENSPLAP00000009052	ANF_receptor domain-containing protein. (247 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000716	ENSPLAP00000002780	ENSPLAP00000000716	ENSPLAP00000002780	Uncharacterized protein.	Uncharacterized protein.	0.610
ENSPLAP00000000716	ENSPLAP00000009052	ENSPLAP00000000716	ENSPLAP00000009052	Uncharacterized protein.	ANF_receptor domain-containing protein.	0.619
ENSPLAP00000000716	ENSPLAP00000013170	ENSPLAP00000000716	ENSPLAP00000013170	Uncharacterized protein.	Uncharacterized protein.	0.462
ENSPLAP00000000716	ENSPLAP00000013180	ENSPLAP00000000716	ENSPLAP00000013180	Uncharacterized protein.	PDZ domain-containing protein.	0.462
ENSPLAP00000000716	ENSPLAP00000013254	ENSPLAP00000000716	ENSPLAP00000013254	Uncharacterized protein.	SH3 domain-containing protein.	0.462
ENSPLAP00000000716	ENSPLAP00000014622	ENSPLAP00000000716	ENSPLAP00000014622	Uncharacterized protein.	PDZ domain-containing protein.	0.462
ENSPLAP00000000716	ENSPLAP00000023785	ENSPLAP00000000716	ENSPLAP00000023785	Uncharacterized protein.	ANF_receptor domain-containing protein.	0.425
ENSPLAP00000000716	ENSPLAP00000027784	ENSPLAP00000000716	ENSPLAP00000027784	Uncharacterized protein.	Discs, large homolog 3 (Drosophila).	0.462
ENSPLAP00000000716	ENSPLAP00000028739	ENSPLAP00000000716	ENSPLAP00000028739	Uncharacterized protein.	Discs, large homolog 4b (Drosophila).	0.462
ENSPLAP00000000716	ENSPLAP00000028832	ENSPLAP00000000716	ENSPLAP00000028832	Uncharacterized protein.	CaMKII_AD domain-containing protein.	0.610
ENSPLAP00000000716	ENSPLAP00000029743	ENSPLAP00000000716	ENSPLAP00000029743	Uncharacterized protein.	Uncharacterized protein.	0.425
ENSPLAP00000000716	ENSPLAP00000031123	ENSPLAP00000000716	ENSPLAP00000031123	Uncharacterized protein.	Uncharacterized protein.	0.425
ENSPLAP00000000716	GRIA2	ENSPLAP00000000716	ENSPLAP00000024517	Uncharacterized protein.	Glutamate ionotropic receptor AMPA type subunit 2.	0.829
ENSPLAP00000000716	GRIN2B	ENSPLAP00000000716	ENSPLAP00000012734	Uncharacterized protein.	Glutamate ionotropic receptor NMDA type subunit 2B; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.425
ENSPLAP00000000716	LOC106952308	ENSPLAP00000000716	ENSPLAP00000024261	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.	0.425
ENSPLAP00000000716	LOC106952755	ENSPLAP00000000716	ENSPLAP00000014948	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.462
ENSPLAP00000000716	LOC106954491	ENSPLAP00000000716	ENSPLAP00000021237	Uncharacterized protein.	Uncharacterized protein.	0.829
ENSPLAP00000000716	LOC106954765	ENSPLAP00000000716	ENSPLAP00000012440	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.425
ENSPLAP00000000716	LOC106955742	ENSPLAP00000000716	ENSPLAP00000004558	Uncharacterized protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.425
ENSPLAP00000000716	LOC106957590	ENSPLAP00000000716	ENSPLAP00000026825	Uncharacterized protein.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.425