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nrde2 nrde2 LOC106943114 LOC106943114 uvssa uvssa polr2h polr2h polr2b polr2b polr2f polr2f LOC106953745 LOC106953745 cops3 cops3 ccnh ccnh cops7a cops7a cdk7 cdk7 gtf2h1 gtf2h1 LOC106956601 LOC106956601 COPS6 COPS6 ppp1r42 ppp1r42 polr2a polr2a ZNF830 ZNF830 LOC106943640 LOC106943640 tcea1 tcea1 polr2l polr2l cops8 cops8 LOC106956472 LOC106956472 gps1 gps1 xpa xpa LOC106964401 LOC106964401 usp7 usp7 polr2j polr2j POLR2E POLR2E LOC106938509 LOC106938509 ddb1 ddb1 ENSPLAP00000013662 ENSPLAP00000013662 polr2d polr2d cops2 cops2 rbx1 rbx1 prpf19 prpf19 LOC106942419 LOC106942419 ENSPLAP00000015559 ENSPLAP00000015559 polr2c polr2c ercc6 ercc6 cul4b cul4b aqr aqr ercc3 ercc3 polr2g polr2g gtf2h5 gtf2h5 tceanc2 tceanc2 ercc2 ercc2 ENSPLAP00000020248 ENSPLAP00000020248 cops4 cops4 tceanc tceanc cops5 cops5 LOC106952964 LOC106952964 cul4a cul4a ppie ppie polr2i polr2i gtf2h4 gtf2h4 mnat1 mnat1 rps27a rps27a LOC106951593 LOC106951593 uba52 uba52 ENSPLAP00000028220 ENSPLAP00000028220 gtf2h3 gtf2h3 ercc8 ercc8 xab2 xab2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nrde2NRDE-2, necessary for RNA interference, domain containing. (1205 aa)
LOC106943114General transcription factor IIH, polypeptide 2. (181 aa)
uvssaUV-stimulated scaffold protein A. (687 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC106953745Cyclin H; Belongs to the cyclin family. (318 aa)
cops3COP9 signalosome subunit 3. (423 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
LOC106956601KxDL motif containing 1. (185 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (330 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
ZNF830Zinc finger protein 830. (336 aa)
LOC106943640General transcription factor IIH, polypeptide 2. (275 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
cops8COP9 signalosome subunit 8. (187 aa)
LOC106956472Transcription elongation factor A (SII), 3. (742 aa)
gps1G protein pathway suppressor 1. (486 aa)
xpaXeroderma pigmentosum, complementation group A. (275 aa)
LOC106964401High mobility group nucleosome binding domain 6. (97 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1184 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
LOC106938509kxDL motif-containing protein 1-like. (185 aa)
ddb1Damage-specific DNA binding protein 1. (1139 aa)
ENSPLAP00000013662E1A binding protein p300 b. (2525 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
cops2COP9 signalosome subunit 2. (443 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
LOC106942419COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (349 aa)
ENSPLAP00000015559Ubiquitin-like domain-containing protein. (93 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ercc6Excision repair cross-complementation group 6. (1411 aa)
cul4bCullin 4B; Belongs to the cullin family. (868 aa)
aqrAquarius intron-binding spliceosomal factor. (1468 aa)
ercc3Excision repair cross-complementation group 3. (771 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (177 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
tceanc2Uncharacterized protein. (207 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
ENSPLAP00000020248Uncharacterized protein. (68 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
tceancUncharacterized protein. (355 aa)
cops5COP9 signalosome subunit 5. (336 aa)
LOC106952964Transcription elongation factor A (SII), 2. (302 aa)
cul4aCullin 4A; Belongs to the cullin family. (753 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (419 aa)
mnat1MNAT1 component of CDK activating kinase. (296 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC106951593Si:ch73-1a9.3. (79 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ENSPLAP00000028220Uncharacterized protein. (94 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (300 aa)
ercc8Excision repair cross-complementation group 8. (401 aa)
xab2XPA binding protein 2. (849 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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