23 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (772 aa)
	LOC106937791	Uncharacterized protein. (202 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC106941255	Perilipin; Belongs to the perilipin family. (420 aa)
	ENSPLAP00000010239	Uncharacterized protein. (104 aa)
	ENSPLAP00000009512	Uncharacterized protein. (112 aa)
	ENSPLAP00000009486	BTB domain-containing protein. (203 aa)
	plin2	Perilipin; Belongs to the perilipin family. (448 aa)
	ENSPLAP00000009159	RAB9B, member RAS oncogene family. (222 aa)
	ccne1	Cyclin E1; Belongs to the cyclin family. (434 aa)
	LOC106965199	Si:ch211-11n16.2. (655 aa)
	LOC106942837	Perilipin-2-like. (420 aa)
	lrrc41	Uncharacterized protein. (651 aa)
	LOC106937213	CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (425 aa)
	zfyve1	Zinc finger, FYVE domain containing 1. (790 aa)
	LOC106936677	5-hydroxytryptamine (serotonin) receptor 7a. (416 aa)
	LOC106963886	Von Hippel-Lindau tumor suppressor. (165 aa)
	LOC106949884	Uncharacterized protein. (222 aa)
	RAB9A	RAB9A, member RAS oncogene family. (212 aa)
	ZFYVE1	Uncharacterized protein. (783 aa)
	ENSPLAP00000026613	5-hydroxytryptamine (serotonin) receptor 7b. (396 aa)
	HTR7	5-hydroxytryptamine receptor 7. (492 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	ENSPLAP00000009486	ENSPLAP00000015537	ENSPLAP00000009486	Cullin 3; Belongs to the cullin family.	BTB domain-containing protein.	0.741
CUL3	ENSPLAP00000009512	ENSPLAP00000015537	ENSPLAP00000009512	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.741
CUL3	ENSPLAP00000010239	ENSPLAP00000015537	ENSPLAP00000010239	Cullin 3; Belongs to the cullin family.	Uncharacterized protein.	0.424
CUL3	LOC106937213	ENSPLAP00000015537	ENSPLAP00000007312	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.923
CUL3	LOC106941255	ENSPLAP00000015537	ENSPLAP00000004104	Cullin 3; Belongs to the cullin family.	Perilipin; Belongs to the perilipin family.	0.424
CUL3	LOC106942837	ENSPLAP00000015537	ENSPLAP00000007896	Cullin 3; Belongs to the cullin family.	Perilipin-2-like.	0.424
CUL3	LOC106963886	ENSPLAP00000015537	ENSPLAP00000005149	Cullin 3; Belongs to the cullin family.	Von Hippel-Lindau tumor suppressor.	0.613
CUL3	ccne1	ENSPLAP00000015537	ENSPLAP00000008601	Cullin 3; Belongs to the cullin family.	Cyclin E1; Belongs to the cyclin family.	0.822
CUL3	plin2	ENSPLAP00000015537	ENSPLAP00000009468	Cullin 3; Belongs to the cullin family.	Perilipin; Belongs to the perilipin family.	0.424
ENSPLAP00000009159	ENSPLAP00000009486	ENSPLAP00000009159	ENSPLAP00000009486	RAB9B, member RAS oncogene family.	BTB domain-containing protein.	0.607
ENSPLAP00000009159	ENSPLAP00000009512	ENSPLAP00000009159	ENSPLAP00000009512	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.607
ENSPLAP00000009159	ENSPLAP00000010239	ENSPLAP00000009159	ENSPLAP00000010239	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.413
ENSPLAP00000009159	LOC106937791	ENSPLAP00000009159	ENSPLAP00000018312	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.897
ENSPLAP00000009159	LOC106941255	ENSPLAP00000009159	ENSPLAP00000004104	RAB9B, member RAS oncogene family.	Perilipin; Belongs to the perilipin family.	0.413
ENSPLAP00000009159	LOC106942837	ENSPLAP00000009159	ENSPLAP00000007896	RAB9B, member RAS oncogene family.	Perilipin-2-like.	0.413
ENSPLAP00000009159	LOC106949884	ENSPLAP00000009159	ENSPLAP00000004963	RAB9B, member RAS oncogene family.	Uncharacterized protein.	0.954
ENSPLAP00000009159	RAB9A	ENSPLAP00000009159	ENSPLAP00000022486	RAB9B, member RAS oncogene family.	RAB9A, member RAS oncogene family.	0.897
ENSPLAP00000009159	plin2	ENSPLAP00000009159	ENSPLAP00000009468	RAB9B, member RAS oncogene family.	Perilipin; Belongs to the perilipin family.	0.413
ENSPLAP00000009486	CUL3	ENSPLAP00000009486	ENSPLAP00000015537	BTB domain-containing protein.	Cullin 3; Belongs to the cullin family.	0.741
ENSPLAP00000009486	ENSPLAP00000009159	ENSPLAP00000009486	ENSPLAP00000009159	BTB domain-containing protein.	RAB9B, member RAS oncogene family.	0.607