STRINGSTRING
vim vim tmod3 tmod3 tra2b tra2b cpsf6 cpsf6 LOC106937926 LOC106937926 LOC106953185 LOC106953185 ENSPLAP00000002262 ENSPLAP00000002262 LOC106950580 LOC106950580 ENSPLAP00000000575 ENSPLAP00000000575 LOC106953753 LOC106953753 LOC106937721 LOC106937721 LOC106937213 LOC106937213 LOC106947170 LOC106947170 TWF1 TWF1 ENSPLAP00000006937 ENSPLAP00000006937 rbmx rbmx LOC106948335 LOC106948335 cirbp cirbp gps1 gps1 myo6 myo6 LOC106955542 LOC106955542 cct2 cct2 rhobtb2 rhobtb2 msi1 msi1 LOC106950198 LOC106950198 MSI2 MSI2 LOC106942557 LOC106942557 LOC106960330 LOC106960330 cops2 cops2 LOC106934797 LOC106934797 STK38 STK38 LOC106942419 LOC106942419 CUL3 CUL3 CDC37 CDC37 SCAF8 SCAF8 twf1 twf1 ENSPLAP00000018758 ENSPLAP00000018758 ENSPLAP00000019348 ENSPLAP00000019348 ENSPLAP00000019353 ENSPLAP00000019353 LOC106942097 LOC106942097 LOC106945923 LOC106945923 cops4 cops4 txnl1 txnl1 srrm1 srrm1 actb actb dazap1 dazap1 ralyl ralyl LOC106955541 LOC106955541 LOC106958188 LOC106958188 cct7 cct7 rbbp6 rbbp6 TRA2B TRA2B LOC106965063 LOC106965063 LOC106960335 LOC106960335 ENSPLAP00000027787 ENSPLAP00000027787 rnf20 rnf20 LOC106942468 LOC106942468 LOC106956760 LOC106956760 LOC106954676 LOC106954676 rock1 rock1 ROCK2-2 ROCK2-2 LOC106941339 LOC106941339 twf2 twf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vimVimentin like; Belongs to the intermediate filament family. (441 aa)
tmod3Tropomodulin 2. (346 aa)
tra2bTransformer 2 beta homolog. (279 aa)
cpsf6Cleavage and polyadenylation specific factor 6. (586 aa)
LOC106937926SR-related CTD associated factor 4. (763 aa)
LOC106953185RRM domain-containing protein. (321 aa)
ENSPLAP00000002262Uncharacterized protein; Belongs to the actin family. (315 aa)
LOC106950580SR-related CTD-associated factor 4a. (815 aa)
ENSPLAP00000000575annotation not available (99 aa)
LOC106953753Rho related BTB domain containing 4. (721 aa)
LOC106937721Uncharacterized protein. (1615 aa)
LOC106937213CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
LOC106947170RRM domain-containing protein. (354 aa)
TWF1Twinfilin actin binding protein 1. (150 aa)
ENSPLAP00000006937DWNN domain-containing protein. (65 aa)
rbmxRNA binding motif protein X-linked. (383 aa)
LOC106948335Uncharacterized protein. (375 aa)
cirbpCold inducible RNA binding protein b. (185 aa)
gps1G protein pathway suppressor 1. (486 aa)
myo6Myosin VIa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1289 aa)
LOC106955542Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1. (767 aa)
cct2Chaperonin containing TCP1, subunit 2 (beta). (530 aa)
rhobtb2Rho related BTB domain containing 2a. (720 aa)
msi1Uncharacterized protein. (349 aa)
LOC106950198Rho-associated, coiled-coil containing protein kinase 2a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1329 aa)
MSI2Musashi RNA-binding protein 2a. (182 aa)
LOC106942557Uncharacterized protein; Belongs to the actin family. (421 aa)
LOC106960330Twinfilin actin-binding protein 2b. (349 aa)
cops2COP9 signalosome subunit 2. (443 aa)
LOC106934797Uncharacterized protein. (1208 aa)
STK38Non-specific serine/threonine protein kinase. (511 aa)
LOC106942419COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (349 aa)
CUL3Cullin 3; Belongs to the cullin family. (766 aa)
CDC37Cell division cycle 37 homolog (S. cerevisiae). (375 aa)
SCAF8SR-related CTD associated factor 8. (1382 aa)
twf1Twinfilin actin-binding protein 1a. (350 aa)
ENSPLAP00000018758Uncharacterized protein; Belongs to the protein kinase superfamily. (427 aa)
ENSPLAP00000019348SPOC domain-containing protein. (241 aa)
ENSPLAP00000019353RRM domain-containing protein. (332 aa)
LOC106942097Serine/arginine repetitive matrix 1. (804 aa)
LOC106945923Uncharacterized protein. (375 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
txnl1Thioredoxin-like 1. (289 aa)
srrm1Serine and arginine repetitive matrix 1. (804 aa)
actbUncharacterized protein. (389 aa)
dazap1DAZ associated protein 1. (404 aa)
ralylRRM domain-containing protein. (286 aa)
LOC106955541Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (733 aa)
LOC106958188Uncharacterized protein. (407 aa)
cct7T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (546 aa)
rbbp6Uncharacterized protein. (1669 aa)
TRA2BTransformer 2 beta homolog. (292 aa)
LOC106965063RRM domain-containing protein. (306 aa)
LOC106960335Si:ch1073-335m2.2. (3148 aa)
ENSPLAP00000027787RRM domain-containing protein. (271 aa)
rnf20E3 ubiquitin protein ligase. (1023 aa)
LOC106942468Heat shock protein 90, alpha (cytosolic), class B member 1. (723 aa)
LOC106956760Musashi RNA binding protein 2. (188 aa)
LOC106954676Phosphodiesterase. (761 aa)
rock1Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1364 aa)
ROCK2-2Rho-associated protein kinase 2-like. (1329 aa)
LOC106941339Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1052 aa)
twf2Twinfilin actin-binding protein 2a. (352 aa)
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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