37 items (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106963030	Hexosyltransferase. (422 aa)
	ENSPLAP00000008162	Hexosyltransferase. (400 aa)
	LOC106959659	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3. (428 aa)
	b3gnt9	Hexosyltransferase. (461 aa)
	st3gal2	ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (368 aa)
	armc9	Armadillo repeat containing 9. (825 aa)
	b4galt1	DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like. (367 aa)
	ENSPLAP00000001640	Uncharacterized protein. (248 aa)
	ENSPLAP00000003411	Sulfotransferase; Belongs to the sulfotransferase 1 family. (397 aa)
	ENSPLAP00000014245	Sulfotransferase; Belongs to the sulfotransferase 1 family. (457 aa)
	ENSPLAP00000003426	Sulfotransferase; Belongs to the sulfotransferase 1 family. (370 aa)
	ENSPLAP00000003432	Sulfotransferase; Belongs to the sulfotransferase 1 family. (409 aa)
	LOC106958289	ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family. (324 aa)
	LOC106941811	Hexosyltransferase. (399 aa)
	ENSPLAP00000005948	Hexosyltransferase. (411 aa)
	LOC106941301	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (342 aa)
	LOC106960745	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (333 aa)
	ENSPLAP00000030045	Carbohydrate sulfotransferase 6. (397 aa)
	ENSPLAP00000030027	Sulfotransferase; Belongs to the sulfotransferase 1 family. (397 aa)
	LOC106940657	Uncharacterized protein. (338 aa)
	ENSPLAP00000027463	WD_REPEATS_REGION domain-containing protein. (101 aa)
	LOC106949031	Hexosyltransferase. (436 aa)
	LOC106944964	Uncharacterized protein. (349 aa)
	ENSPLAP00000022406	Carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b. (457 aa)
	fut8	Fucosyltransferase 8b (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family. (391 aa)
	LOC106940271	Sulfotransferase; Belongs to the sulfotransferase 1 family. (396 aa)
	chst1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (428 aa)
	LOC106964729	Si:dkey-199f5.8. (388 aa)
	b4galt4	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4. (348 aa)
	ENSPLAP00000018994	Hexosyltransferase. (426 aa)
	LOC106946055	ST3 beta-galactoside alpha-2,3-sialyltransferase 8; Belongs to the glycosyltransferase 29 family. (384 aa)
	LOC106937530	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like. (422 aa)
	LOC106940618	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like. (263 aa)
	LOC106940656	Uncharacterized protein. (352 aa)
	ENSPLAP00000016180	Uncharacterized protein. (182 aa)
	ENSPLAP00000015591	Hexosyltransferase. (406 aa)
	LOC106963015	Fucosyltransferase 8b (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family. (305 aa)

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000001640	ENSPLAP00000005948	ENSPLAP00000001640	ENSPLAP00000005948	Uncharacterized protein.	Hexosyltransferase.	0.614
ENSPLAP00000001640	ENSPLAP00000008162	ENSPLAP00000001640	ENSPLAP00000008162	Uncharacterized protein.	Hexosyltransferase.	0.506
ENSPLAP00000001640	ENSPLAP00000015591	ENSPLAP00000001640	ENSPLAP00000015591	Uncharacterized protein.	Hexosyltransferase.	0.506
ENSPLAP00000001640	ENSPLAP00000018994	ENSPLAP00000001640	ENSPLAP00000018994	Uncharacterized protein.	Hexosyltransferase.	0.473
ENSPLAP00000001640	LOC106937530	ENSPLAP00000001640	ENSPLAP00000017121	Uncharacterized protein.	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like.	0.473
ENSPLAP00000001640	LOC106941811	ENSPLAP00000001640	ENSPLAP00000005223	Uncharacterized protein.	Hexosyltransferase.	0.505
ENSPLAP00000001640	LOC106949031	ENSPLAP00000001640	ENSPLAP00000027349	Uncharacterized protein.	Hexosyltransferase.	0.614
ENSPLAP00000001640	LOC106958289	ENSPLAP00000001640	ENSPLAP00000003595	Uncharacterized protein.	ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family.	0.662
ENSPLAP00000001640	LOC106959659	ENSPLAP00000001640	ENSPLAP00000010524	Uncharacterized protein.	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.	0.480
ENSPLAP00000001640	LOC106963015	ENSPLAP00000001640	ENSPLAP00000015268	Uncharacterized protein.	Fucosyltransferase 8b (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family.	0.770
ENSPLAP00000001640	LOC106963030	ENSPLAP00000001640	ENSPLAP00000006048	Uncharacterized protein.	Hexosyltransferase.	0.473
ENSPLAP00000001640	LOC106964729	ENSPLAP00000001640	ENSPLAP00000021119	Uncharacterized protein.	Si:dkey-199f5.8.	0.480
ENSPLAP00000001640	b3gnt9	ENSPLAP00000001640	ENSPLAP00000010810	Uncharacterized protein.	Hexosyltransferase.	0.473
ENSPLAP00000001640	b4galt1	ENSPLAP00000001640	ENSPLAP00000000030	Uncharacterized protein.	DP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, like.	0.606
ENSPLAP00000001640	b4galt4	ENSPLAP00000001640	ENSPLAP00000019929	Uncharacterized protein.	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4.	0.485
ENSPLAP00000001640	fut8	ENSPLAP00000001640	ENSPLAP00000021700	Uncharacterized protein.	Fucosyltransferase 8b (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family.	0.860
ENSPLAP00000003411	ENSPLAP00000003426	ENSPLAP00000003411	ENSPLAP00000003426	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.915
ENSPLAP00000003411	ENSPLAP00000003432	ENSPLAP00000003411	ENSPLAP00000003432	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.920
ENSPLAP00000003426	ENSPLAP00000003411	ENSPLAP00000003426	ENSPLAP00000003411	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.915
ENSPLAP00000003426	ENSPLAP00000003432	ENSPLAP00000003426	ENSPLAP00000003432	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.909