(19 nodes) Nucleotide-activated protein kinase complex, and Mo25-like network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106930974	Protein kinase, AMP-activated, gamma 3b non-catalytic subunit. (392 aa)
	LOC106919797	Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b. (544 aa)
	prkag3	Protein kinase, AMP-activated, gamma 3a non-catalytic subunit. (353 aa)
	camkk2	Si:ch73-62l21.1. (572 aa)
	LOC106927488	Protein kinase domain-containing protein. (430 aa)
	cab39	Calcium binding protein 39. (341 aa)
	LOC106917718	Calcium binding protein 39, like 1. (343 aa)
	prkab1	Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a. (269 aa)
	strada	STE20 related adaptor alpha. (428 aa)
	LOC106906561	Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b. (265 aa)
	PRKAB2	Protein kinase AMP-activated non-catalytic subunit beta 2. (267 aa)
	prkag1	Protein kinase, AMP-activated, gamma 1 non-catalytic subunit. (334 aa)
	LOC106903347	Protein kinase domain-containing protein. (284 aa)
	stk11	Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (439 aa)
	prkaa1	Non-specific serine/threonine protein kinase. (564 aa)
	LOC106905422	Calcium binding protein 39-like. (334 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (555 aa)
	LOC106933334	Serine/threonine-protein kinase STK11-like. (439 aa)
	LOC106911661	Uncharacterized protein. (690 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106903347	LOC106905422	ENSPMEP00000019841	ENSPMEP00000024357	Protein kinase domain-containing protein.	Calcium binding protein 39-like.	0.687
LOC106903347	LOC106906561	ENSPMEP00000019841	ENSPMEP00000010692	Protein kinase domain-containing protein.	Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.	0.841
LOC106903347	LOC106911661	ENSPMEP00000019841	ENSPMEP00000033865	Protein kinase domain-containing protein.	Uncharacterized protein.	0.796
LOC106903347	LOC106917718	ENSPMEP00000019841	ENSPMEP00000008008	Protein kinase domain-containing protein.	Calcium binding protein 39, like 1.	0.687
LOC106903347	LOC106919797	ENSPMEP00000019841	ENSPMEP00000004377	Protein kinase domain-containing protein.	Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.	0.796
LOC106903347	LOC106927488	ENSPMEP00000019841	ENSPMEP00000006907	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.714
LOC106903347	LOC106930974	ENSPMEP00000019841	ENSPMEP00000003838	Protein kinase domain-containing protein.	Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.	0.796
LOC106903347	LOC106933334	ENSPMEP00000019841	ENSPMEP00000028615	Protein kinase domain-containing protein.	Serine/threonine-protein kinase STK11-like.	0.740
LOC106903347	PRKAB2	ENSPMEP00000019841	ENSPMEP00000015296	Protein kinase domain-containing protein.	Protein kinase AMP-activated non-catalytic subunit beta 2.	0.841
LOC106903347	cab39	ENSPMEP00000019841	ENSPMEP00000007612	Protein kinase domain-containing protein.	Calcium binding protein 39.	0.687
LOC106903347	camkk2	ENSPMEP00000019841	ENSPMEP00000006906	Protein kinase domain-containing protein.	Si:ch73-62l21.1.	0.740
LOC106903347	prkaa1	ENSPMEP00000019841	ENSPMEP00000022463	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.525
LOC106903347	prkaa2	ENSPMEP00000019841	ENSPMEP00000028464	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.526
LOC106903347	prkab1	ENSPMEP00000019841	ENSPMEP00000008378	Protein kinase domain-containing protein.	Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.	0.841
LOC106903347	prkag1	ENSPMEP00000019841	ENSPMEP00000017751	Protein kinase domain-containing protein.	Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.	0.796
LOC106903347	prkag3	ENSPMEP00000019841	ENSPMEP00000006005	Protein kinase domain-containing protein.	Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.	0.796
LOC106903347	stk11	ENSPMEP00000019841	ENSPMEP00000021811	Protein kinase domain-containing protein.	Serine/threonine kinase 11; Belongs to the protein kinase superfamily.	0.740
LOC106903347	strada	ENSPMEP00000019841	ENSPMEP00000008855	Protein kinase domain-containing protein.	STE20 related adaptor alpha.	0.714
LOC106905422	LOC106903347	ENSPMEP00000024357	ENSPMEP00000019841	Calcium binding protein 39-like.	Protein kinase domain-containing protein.	0.687
LOC106905422	LOC106906561	ENSPMEP00000024357	ENSPMEP00000010692	Calcium binding protein 39-like.	Protein kinase, AMP-activated, beta 1 non-catalytic subunit, b.	0.563