13 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrpl3	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (344 aa)
	mrpl20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (148 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	mrpl22	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (208 aa)
	mrpl4	Mitochondrial ribosomal protein L4. (302 aa)
	mrpl33	Mitochondrial ribosomal protein L33. (65 aa)
	mrpl9	Mitochondrial ribosomal protein L9. (288 aa)
	mrpl32	Mitochondrial ribosomal protein L32. (181 aa)
	ENSPMEP00000014065	Mitochondrial ribosomal protein L21. (204 aa)
	mrpl15	Mitochondrial ribosomal protein L15. (296 aa)
	mrpl12	Mitochondrial ribosomal protein L12. (196 aa)
	mrpl24	Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. (216 aa)
	ENSPMEP00000032297	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (111 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000014065	ENSPMEP00000032297	ENSPMEP00000014065	ENSPMEP00000032297	Mitochondrial ribosomal protein L21.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
ENSPMEP00000014065	mrpl12	ENSPMEP00000014065	ENSPMEP00000018509	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L12.	0.999
ENSPMEP00000014065	mrpl15	ENSPMEP00000014065	ENSPMEP00000015506	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L15.	0.999
ENSPMEP00000014065	mrpl20	ENSPMEP00000014065	ENSPMEP00000001617	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.999
ENSPMEP00000014065	mrpl22	ENSPMEP00000014065	ENSPMEP00000002429	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.999
ENSPMEP00000014065	mrpl24	ENSPMEP00000014065	ENSPMEP00000026668	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.999
ENSPMEP00000014065	mrpl3	ENSPMEP00000014065	ENSPMEP00000001191	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.999
ENSPMEP00000014065	mrpl32	ENSPMEP00000014065	ENSPMEP00000010195	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L32.	0.999
ENSPMEP00000014065	mrpl33	ENSPMEP00000014065	ENSPMEP00000006954	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L33.	0.999
ENSPMEP00000014065	mrpl4	ENSPMEP00000014065	ENSPMEP00000003748	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L4.	0.999
ENSPMEP00000014065	mrpl9	ENSPMEP00000014065	ENSPMEP00000008780	Mitochondrial ribosomal protein L21.	Mitochondrial ribosomal protein L9.	0.999
ENSPMEP00000014065	rps15	ENSPMEP00000014065	ENSPMEP00000002080	Mitochondrial ribosomal protein L21.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
ENSPMEP00000032297	ENSPMEP00000014065	ENSPMEP00000032297	ENSPMEP00000014065	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L21.	0.999
ENSPMEP00000032297	mrpl12	ENSPMEP00000032297	ENSPMEP00000018509	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L12.	0.999
ENSPMEP00000032297	mrpl15	ENSPMEP00000032297	ENSPMEP00000015506	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L15.	0.999
ENSPMEP00000032297	mrpl20	ENSPMEP00000032297	ENSPMEP00000001617	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.999
ENSPMEP00000032297	mrpl22	ENSPMEP00000032297	ENSPMEP00000002429	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.	0.999
ENSPMEP00000032297	mrpl24	ENSPMEP00000032297	ENSPMEP00000026668	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.996
ENSPMEP00000032297	mrpl3	ENSPMEP00000032297	ENSPMEP00000001191	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.999
ENSPMEP00000032297	mrpl32	ENSPMEP00000032297	ENSPMEP00000010195	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L32.	0.999