(5 nodes) Synaptobrevin/Vesicle-associated membrane protein, and HOPS complex network (Poecilia mexicana)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snap29	Synaptosome associated protein 29. (258 aa)
	stx17	Syntaxin 17; Belongs to the syntaxin family. (298 aa)
	LOC106926931	Si:ch73-234b20.5. (147 aa)
	LOC106903399	Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
	LOC106903400	V-SNARE coiled-coil homology domain-containing protein. (121 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106903399	LOC106903400	ENSPMEP00000033290	ENSPMEP00000033306	Vesicle-associated membrane protein 8 (endobrevin).	V-SNARE coiled-coil homology domain-containing protein.	0.901
LOC106903399	LOC106926931	ENSPMEP00000033290	ENSPMEP00000025355	Vesicle-associated membrane protein 8 (endobrevin).	Si:ch73-234b20.5.	0.913
LOC106903399	snap29	ENSPMEP00000033290	ENSPMEP00000017543	Vesicle-associated membrane protein 8 (endobrevin).	Synaptosome associated protein 29.	0.997
LOC106903399	stx17	ENSPMEP00000033290	ENSPMEP00000019669	Vesicle-associated membrane protein 8 (endobrevin).	Syntaxin 17; Belongs to the syntaxin family.	0.995
LOC106903400	LOC106903399	ENSPMEP00000033306	ENSPMEP00000033290	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 8 (endobrevin).	0.901
LOC106903400	LOC106926931	ENSPMEP00000033306	ENSPMEP00000025355	V-SNARE coiled-coil homology domain-containing protein.	Si:ch73-234b20.5.	0.914
LOC106903400	snap29	ENSPMEP00000033306	ENSPMEP00000017543	V-SNARE coiled-coil homology domain-containing protein.	Synaptosome associated protein 29.	0.994
LOC106903400	stx17	ENSPMEP00000033306	ENSPMEP00000019669	V-SNARE coiled-coil homology domain-containing protein.	Syntaxin 17; Belongs to the syntaxin family.	0.994
LOC106926931	LOC106903399	ENSPMEP00000025355	ENSPMEP00000033290	Si:ch73-234b20.5.	Vesicle-associated membrane protein 8 (endobrevin).	0.913
LOC106926931	LOC106903400	ENSPMEP00000025355	ENSPMEP00000033306	Si:ch73-234b20.5.	V-SNARE coiled-coil homology domain-containing protein.	0.914
LOC106926931	snap29	ENSPMEP00000025355	ENSPMEP00000017543	Si:ch73-234b20.5.	Synaptosome associated protein 29.	0.966
LOC106926931	stx17	ENSPMEP00000025355	ENSPMEP00000019669	Si:ch73-234b20.5.	Syntaxin 17; Belongs to the syntaxin family.	0.966
snap29	LOC106903399	ENSPMEP00000017543	ENSPMEP00000033290	Synaptosome associated protein 29.	Vesicle-associated membrane protein 8 (endobrevin).	0.997
snap29	LOC106903400	ENSPMEP00000017543	ENSPMEP00000033306	Synaptosome associated protein 29.	V-SNARE coiled-coil homology domain-containing protein.	0.994
snap29	LOC106926931	ENSPMEP00000017543	ENSPMEP00000025355	Synaptosome associated protein 29.	Si:ch73-234b20.5.	0.966
snap29	stx17	ENSPMEP00000017543	ENSPMEP00000019669	Synaptosome associated protein 29.	Syntaxin 17; Belongs to the syntaxin family.	0.999
stx17	LOC106903399	ENSPMEP00000019669	ENSPMEP00000033290	Syntaxin 17; Belongs to the syntaxin family.	Vesicle-associated membrane protein 8 (endobrevin).	0.995
stx17	LOC106903400	ENSPMEP00000019669	ENSPMEP00000033306	Syntaxin 17; Belongs to the syntaxin family.	V-SNARE coiled-coil homology domain-containing protein.	0.994
stx17	LOC106926931	ENSPMEP00000019669	ENSPMEP00000025355	Syntaxin 17; Belongs to the syntaxin family.	Si:ch73-234b20.5.	0.966
stx17	snap29	ENSPMEP00000019669	ENSPMEP00000017543	Syntaxin 17; Belongs to the syntaxin family.	Synaptosome associated protein 29.	0.999