(10 nodes) ESCRT I complex network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vps37b	Zgc:114173. (284 aa)
	LOC106922030	Uncharacterized protein. (282 aa)
	ENSPMEP00000007759	MABP domain-containing protein. (103 aa)
	mvb12b	Multivesicular body subunit 12Ba. (238 aa)
	LOC106917343	Zgc:123278. (186 aa)
	LOC106904543	MABP domain-containing protein. (230 aa)
	vps37a	VPS37A subunit of ESCRT-I. (388 aa)
	LOC106907832	VPS37C subunit of ESCRT-I. (360 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (212 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000007759	LOC106904543	ENSPMEP00000007759	ENSPMEP00000022208	MABP domain-containing protein.	MABP domain-containing protein.	0.934
ENSPMEP00000007759	LOC106907832	ENSPMEP00000007759	ENSPMEP00000030963	MABP domain-containing protein.	VPS37C subunit of ESCRT-I.	0.926
ENSPMEP00000007759	LOC106917343	ENSPMEP00000007759	ENSPMEP00000018015	MABP domain-containing protein.	Zgc:123278.	0.930
ENSPMEP00000007759	LOC106922030	ENSPMEP00000007759	ENSPMEP00000004593	MABP domain-containing protein.	Uncharacterized protein.	0.942
ENSPMEP00000007759	tsg101	ENSPMEP00000007759	ENSPMEP00000032797	MABP domain-containing protein.	Tumor susceptibility 101a.	0.930
ENSPMEP00000007759	vps28	ENSPMEP00000007759	ENSPMEP00000033325	MABP domain-containing protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.974
ENSPMEP00000007759	vps37a	ENSPMEP00000007759	ENSPMEP00000024063	MABP domain-containing protein.	VPS37A subunit of ESCRT-I.	0.941
ENSPMEP00000007759	vps37b	ENSPMEP00000007759	ENSPMEP00000003760	MABP domain-containing protein.	Zgc:114173.	0.974
LOC106904543	ENSPMEP00000007759	ENSPMEP00000022208	ENSPMEP00000007759	MABP domain-containing protein.	MABP domain-containing protein.	0.934
LOC106904543	LOC106907832	ENSPMEP00000022208	ENSPMEP00000030963	MABP domain-containing protein.	VPS37C subunit of ESCRT-I.	0.926
LOC106904543	LOC106917343	ENSPMEP00000022208	ENSPMEP00000018015	MABP domain-containing protein.	Zgc:123278.	0.930
LOC106904543	LOC106922030	ENSPMEP00000022208	ENSPMEP00000004593	MABP domain-containing protein.	Uncharacterized protein.	0.943
LOC106904543	mvb12b	ENSPMEP00000022208	ENSPMEP00000017004	MABP domain-containing protein.	Multivesicular body subunit 12Ba.	0.935
LOC106904543	tsg101	ENSPMEP00000022208	ENSPMEP00000032797	MABP domain-containing protein.	Tumor susceptibility 101a.	0.930
LOC106904543	vps28	ENSPMEP00000022208	ENSPMEP00000033325	MABP domain-containing protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.974
LOC106904543	vps37a	ENSPMEP00000022208	ENSPMEP00000024063	MABP domain-containing protein.	VPS37A subunit of ESCRT-I.	0.941
LOC106904543	vps37b	ENSPMEP00000022208	ENSPMEP00000003760	MABP domain-containing protein.	Zgc:114173.	0.974
LOC106907832	ENSPMEP00000007759	ENSPMEP00000030963	ENSPMEP00000007759	VPS37C subunit of ESCRT-I.	MABP domain-containing protein.	0.926
LOC106907832	LOC106904543	ENSPMEP00000030963	ENSPMEP00000022208	VPS37C subunit of ESCRT-I.	MABP domain-containing protein.	0.926
LOC106907832	LOC106917343	ENSPMEP00000030963	ENSPMEP00000018015	VPS37C subunit of ESCRT-I.	Zgc:123278.	0.929