(33 nodes) Linoleic acid metabolism, and Lipoxygenase network (Poecilia mexicana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPMEP00000002549	Uncharacterized protein; Belongs to the cytochrome P450 family. (150 aa)
	LOC106906872	LRAT domain-containing protein. (172 aa)
	pla2g4a	Phospholipase A2. (749 aa)
	ENSPMEP00000005437	Uncharacterized protein; Belongs to the cytochrome P450 family. (150 aa)
	LOC106909732	Lipoxygenase domain-containing protein. (133 aa)
	LOC106921618	Phospholipase A(2). (149 aa)
	jmjd7	Jumonji domain containing 7. (312 aa)
	LOC106924946	Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family. (590 aa)
	pla2g1b	Phospholipase A(2). (144 aa)
	ENSPMEP00000010623	Phospholipase A(2). (141 aa)
	LOC106925463	Uncharacterized protein. (589 aa)
	pla2g12b	Phospholipase A2, group XIIB. (204 aa)
	LOC106904842	Uncharacterized protein; Belongs to the cytochrome P450 family. (500 aa)
	ENSPMEP00000018895	Uncharacterized protein; Belongs to the cytochrome P450 family. (150 aa)
	LOC106908422	Uncharacterized protein; Belongs to the cytochrome P450 family. (498 aa)
	LOC106908423	Uncharacterized protein; Belongs to the cytochrome P450 family. (498 aa)
	LOC106908423-2	Uncharacterized protein; Belongs to the cytochrome P450 family. (497 aa)
	LOC106921805	Uncharacterized protein. (211 aa)
	LOC106922288	Zgc:152891. (620 aa)
	LOC106907495	Protein interacting with cyclin A1. (816 aa)
	pla2g6	Phospholipase A2, group VI (cytosolic, calcium-independent). (799 aa)
	LOC106912355	Uncharacterized protein; Belongs to the cytochrome P450 family. (425 aa)
	ENSPMEP00000024509	Uncharacterized protein. (310 aa)
	ENSPMEP00000024525	Uncharacterized protein; Belongs to the cytochrome P450 family. (473 aa)
	LOC106909731	Uncharacterized protein. (605 aa)
	LOC106933562	Phospholipase A(2). (152 aa)
	LOC106930849	Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family. (539 aa)
	pla2g12a	Phospholipase A2, group XIIA. (198 aa)
	LOC106921230	PA2c domain-containing protein. (466 aa)
	LOC106908420	Uncharacterized protein; Belongs to the cytochrome P450 family. (502 aa)
	LOC106908421	Uncharacterized protein; Belongs to the cytochrome P450 family. (497 aa)
	LOC106908424	Cytochrome P450, family 2, subfamily AD, polypeptide 3; Belongs to the cytochrome P450 family. (493 aa)
	LOC106917266	Arachidonate 12-lipoxygenase. (670 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000002549	ENSPMEP00000005437	ENSPMEP00000002549	ENSPMEP00000005437	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.734
ENSPMEP00000002549	ENSPMEP00000010623	ENSPMEP00000002549	ENSPMEP00000010623	Uncharacterized protein; Belongs to the cytochrome P450 family.	Phospholipase A(2).	0.692
ENSPMEP00000002549	ENSPMEP00000024509	ENSPMEP00000002549	ENSPMEP00000024509	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.841
ENSPMEP00000002549	ENSPMEP00000024525	ENSPMEP00000002549	ENSPMEP00000024525	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.734
ENSPMEP00000002549	LOC106904842	ENSPMEP00000002549	ENSPMEP00000018715	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.496
ENSPMEP00000002549	LOC106906872	ENSPMEP00000002549	ENSPMEP00000002662	Uncharacterized protein; Belongs to the cytochrome P450 family.	LRAT domain-containing protein.	0.815
ENSPMEP00000002549	LOC106907495	ENSPMEP00000002549	ENSPMEP00000021752	Uncharacterized protein; Belongs to the cytochrome P450 family.	Protein interacting with cyclin A1.	0.612
ENSPMEP00000002549	LOC106908420	ENSPMEP00000002549	ENSPMEP00000033376	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.472
ENSPMEP00000002549	LOC106908422	ENSPMEP00000002549	ENSPMEP00000019396	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.852
ENSPMEP00000002549	LOC106908423	ENSPMEP00000002549	ENSPMEP00000019399	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.672
ENSPMEP00000002549	LOC106908423-2	ENSPMEP00000002549	ENSPMEP00000019419	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.672
ENSPMEP00000002549	LOC106908424	ENSPMEP00000002549	ENSPMEP00000033719	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450, family 2, subfamily AD, polypeptide 3; Belongs to the cytochrome P450 family.	0.490
ENSPMEP00000002549	LOC106909731	ENSPMEP00000002549	ENSPMEP00000024636	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.834
ENSPMEP00000002549	LOC106909732	ENSPMEP00000002549	ENSPMEP00000005761	Uncharacterized protein; Belongs to the cytochrome P450 family.	Lipoxygenase domain-containing protein.	0.518
ENSPMEP00000002549	LOC106912355	ENSPMEP00000002549	ENSPMEP00000023588	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.797
ENSPMEP00000002549	LOC106917266	ENSPMEP00000002549	ENSPMEP00000034287	Uncharacterized protein; Belongs to the cytochrome P450 family.	Arachidonate 12-lipoxygenase.	0.866
ENSPMEP00000002549	LOC106921230	ENSPMEP00000002549	ENSPMEP00000033175	Uncharacterized protein; Belongs to the cytochrome P450 family.	PA2c domain-containing protein.	0.783
ENSPMEP00000002549	LOC106921618	ENSPMEP00000002549	ENSPMEP00000008414	Uncharacterized protein; Belongs to the cytochrome P450 family.	Phospholipase A(2).	0.798
ENSPMEP00000002549	LOC106921805	ENSPMEP00000002549	ENSPMEP00000020242	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.800
ENSPMEP00000002549	LOC106922288	ENSPMEP00000002549	ENSPMEP00000020986	Uncharacterized protein; Belongs to the cytochrome P450 family.	Zgc:152891.	0.784