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ENSPMEP00000002318 ENSPMEP00000002318 lsm7 lsm7 xab2 xab2 ppil1 ppil1 SART1 SART1 lix1l lix1l sf3b5 sf3b5 luc7l luc7l sf3b3 sf3b3 ppie ppie lsm2 lsm2 SMU1 SMU1 LOC106919282 LOC106919282 DHX15 DHX15 SNIP1 SNIP1 luc7l3 luc7l3 snrpg snrpg ENSPMEP00000015289 ENSPMEP00000015289 prpf39 prpf39 htatsf1 htatsf1 snrpa1 snrpa1 snrnp40 snrnp40 cwc15 cwc15 ENSPMEP00000000741 ENSPMEP00000000741 bud13 bud13 u2af2 u2af2 lsm6 lsm6 sf3b6 sf3b6 eftud2 eftud2 bcas2 bcas2 dhx16 dhx16 prpf4 prpf4 rbm22 rbm22 eif4a3 eif4a3 tfip11 tfip11 snrpd3 snrpd3 prpf19 prpf19 cwc27 cwc27 crnkl1 crnkl1 ccdc130 ccdc130 prpf6 prpf6 phf5a phf5a ENSPMEP00000008527 ENSPMEP00000008527 ccdc12 ccdc12 wbp4 wbp4 cwc25 cwc25 zmat2 zmat2 snrpe snrpe LOC106930308 LOC106930308 mfap1 mfap1 LOC106927112 LOC106927112 prpf8 prpf8 aqr aqr prpf18 prpf18 snrpd2 snrpd2 cwc22 cwc22 dhx34 dhx34 dhx8 dhx8 txnl4a txnl4a sf3a2 sf3a2 snrpc snrpc rnf113a rnf113a syf2 syf2 prpf38a prpf38a LOC106920762 LOC106920762 snw1 snw1 sf3b2 sf3b2 rbm8a rbm8a shd shd yju2 yju2 cdc40 cdc40 lsm4 lsm4 prpf31 prpf31 ENSPMEP00000032120 ENSPMEP00000032120 ENSPMEP00000032955 ENSPMEP00000032955 snrpd1 snrpd1 lsm3 lsm3 lsm8 lsm8 snu13 snu13 prpf3 prpf3 lsm5 lsm5 prpf40a prpf40a sf3a3 sf3a3 snrnp200 snrnp200 sf3b1 sf3b1 SNRPN SNRPN plrg1 plrg1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPMEP00000002318Small nuclear ribonucleoprotein polypeptide F. (85 aa)
lsm7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (113 aa)
xab2XPA binding protein 2. (849 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (772 aa)
lix1lSplicing factor 3b, subunit 4. (687 aa)
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
luc7lLUC7-like (S. cerevisiae). (363 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
LOC106919282SMU1 DNA replication regulator and spliceosomal factor b. (508 aa)
DHX15DEAH-box helicase 15. (762 aa)
SNIP1Smad nuclear interacting protein 1. (364 aa)
luc7l3Uncharacterized protein. (485 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
ENSPMEP00000015289Serine/arginine repetitive matrix 4. (410 aa)
prpf39PRP39 pre-mRNA processing factor 39 homolog (yeast). (768 aa)
htatsf1HIV-1 Tat specific factor 1. (444 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (248 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
cwc15CWC15 spliceosome associated protein homolog. (238 aa)
ENSPMEP00000000741WD_REPEATS_REGION domain-containing protein. (121 aa)
bud13BUD13 homolog. (513 aa)
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (470 aa)
lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1052 aa)
prpf4PRP4 pre-mRNA processing factor 4 homolog (yeast). (339 aa)
rbm22RNA binding motif protein 22. (408 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (830 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
cwc27CWC27 spliceosome associated cyclophilin. (473 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (736 aa)
ccdc130Coiled-coil domain containing 130. (393 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
phf5aPHD finger protein 5A. (110 aa)
ENSPMEP00000008527Casc3 exon junction complex subunit. (584 aa)
ccdc12Coiled-coil domain containing 12. (202 aa)
wbp4Uncharacterized protein. (434 aa)
cwc25CWC25 spliceosome associated protein homolog. (396 aa)
zmat2Zinc finger, matrin-type 2. (201 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
LOC106930308Si:ch211-114c17.1. (721 aa)
mfap1Microfibril associated protein 1. (440 aa)
LOC106927112U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (449 aa)
prpf8Pre-mRNA processing factor 8. (2358 aa)
aqrAquarius intron-binding spliceosomal factor. (1471 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
cwc22CWC22 spliceosome associated protein homolog. (1002 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1146 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1250 aa)
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
snrpcU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (147 aa)
rnf113aRing finger protein 113A. (322 aa)
syf2SYF2 pre-mRNA-splicing factor. (236 aa)
prpf38aPre-mRNA processing factor 38A. (309 aa)
LOC106920762Zgc:158803. (421 aa)
snw1SNW domain containing 1. (536 aa)
sf3b2Splicing factor 3b, subunit 2. (855 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
shdSrc homology 2 domain containing transforming protein D, a. (417 aa)
yju2YJU2 splicing factor homolog. (341 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
lsm4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (143 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
ENSPMEP00000032120Splicing factor 3a, subunit 1. (677 aa)
ENSPMEP00000032955SEC63 domain-containing protein. (153 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
lsm3LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated. (149 aa)
lsm8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (691 aa)
lsm5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
prpf40aPRP40 pre-mRNA processing factor 40 homolog A. (883 aa)
sf3a3Splicing factor 3a, subunit 3. (435 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (1841 aa)
sf3b1Splicing factor 3b, subunit 1. (1343 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
plrg1Pleiotropic regulator 1. (513 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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