14 items (Poecilia mexicana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106917550	Uncharacterized protein. (1191 aa)
	cetn2	Centrin, EF-hand protein, 2. (229 aa)
	c2cd3	C2 domain containing 3 centriole elongation regulator. (2176 aa)
	ENSPMEP00000006057	Uncharacterized protein. (385 aa)
	ccp110	Uncharacterized protein. (820 aa)
	sass6	Sas6_CC domain-containing protein. (473 aa)
	cep152	Centrosomal protein 152. (1415 aa)
	cep63	Centrosomal protein 63. (607 aa)
	plk4	Polo-like kinase 4 (Drosophila). (886 aa)
	kiaa0753	Uncharacterized protein. (891 aa)
	ENSPMEP00000019689	CDK5 regulatory subunit associated protein 2. (1112 aa)
	rttn	Rotatin. (2247 aa)
	LOC106924837	Centrin 4. (171 aa)
	cep135	Centrosomal protein 135. (1145 aa)

Your Current Organism:

Poecilia mexicana

NCBI taxonomy Id: 48701
Other names: shortfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPMEP00000006057	ENSPMEP00000019689	ENSPMEP00000006057	ENSPMEP00000019689	Uncharacterized protein.	CDK5 regulatory subunit associated protein 2.	0.413
ENSPMEP00000006057	LOC106924837	ENSPMEP00000006057	ENSPMEP00000028566	Uncharacterized protein.	Centrin 4.	0.490
ENSPMEP00000006057	cep135	ENSPMEP00000006057	ENSPMEP00000033068	Uncharacterized protein.	Centrosomal protein 135.	0.508
ENSPMEP00000006057	cep152	ENSPMEP00000006057	ENSPMEP00000013845	Uncharacterized protein.	Centrosomal protein 152.	0.490
ENSPMEP00000006057	cep63	ENSPMEP00000006057	ENSPMEP00000016555	Uncharacterized protein.	Centrosomal protein 63.	0.592
ENSPMEP00000006057	cetn2	ENSPMEP00000006057	ENSPMEP00000000073	Uncharacterized protein.	Centrin, EF-hand protein, 2.	0.490
ENSPMEP00000006057	plk4	ENSPMEP00000006057	ENSPMEP00000016759	Uncharacterized protein.	Polo-like kinase 4 (Drosophila).	0.980
ENSPMEP00000006057	rttn	ENSPMEP00000006057	ENSPMEP00000024696	Uncharacterized protein.	Rotatin.	0.522
ENSPMEP00000006057	sass6	ENSPMEP00000006057	ENSPMEP00000013721	Uncharacterized protein.	Sas6_CC domain-containing protein.	0.696
ENSPMEP00000019689	ENSPMEP00000006057	ENSPMEP00000019689	ENSPMEP00000006057	CDK5 regulatory subunit associated protein 2.	Uncharacterized protein.	0.413
ENSPMEP00000019689	cep135	ENSPMEP00000019689	ENSPMEP00000033068	CDK5 regulatory subunit associated protein 2.	Centrosomal protein 135.	0.424
ENSPMEP00000019689	cep152	ENSPMEP00000019689	ENSPMEP00000013845	CDK5 regulatory subunit associated protein 2.	Centrosomal protein 152.	0.551
ENSPMEP00000019689	plk4	ENSPMEP00000019689	ENSPMEP00000016759	CDK5 regulatory subunit associated protein 2.	Polo-like kinase 4 (Drosophila).	0.540
LOC106917550	LOC106924837	ENSPMEP00000028945	ENSPMEP00000028566	Uncharacterized protein.	Centrin 4.	0.422
LOC106917550	cep135	ENSPMEP00000028945	ENSPMEP00000033068	Uncharacterized protein.	Centrosomal protein 135.	0.534
LOC106917550	cetn2	ENSPMEP00000028945	ENSPMEP00000000073	Uncharacterized protein.	Centrin, EF-hand protein, 2.	0.422
LOC106917550	plk4	ENSPMEP00000028945	ENSPMEP00000016759	Uncharacterized protein.	Polo-like kinase 4 (Drosophila).	0.782
LOC106917550	sass6	ENSPMEP00000028945	ENSPMEP00000013721	Uncharacterized protein.	Sas6_CC domain-containing protein.	0.526
LOC106924837	ENSPMEP00000006057	ENSPMEP00000028566	ENSPMEP00000006057	Centrin 4.	Uncharacterized protein.	0.490
LOC106924837	LOC106917550	ENSPMEP00000028566	ENSPMEP00000028945	Centrin 4.	Uncharacterized protein.	0.422