STRINGSTRING
LOC106922052 LOC106922052 LOC106915273 LOC106915273 atg12 atg12 lamp2 lamp2 svip svip LOC106911658 LOC106911658 atg16l2 atg16l2 calcoco2 calcoco2 LOC106903400 LOC106903400 LOC106903399 LOC106903399 vps33a vps33a pjvk pjvk ENSPMEP00000032997 ENSPMEP00000032997 atg5 atg5 wdr81 wdr81 ripk2 ripk2 rab23 rab23 LOC106905664 LOC106905664 LOC106909381 LOC106909381 LOC106910166 LOC106910166 atg9a atg9a tecpr1 tecpr1 atg10 atg10 pacs2 pacs2 tp53inp1 tp53inp1 RAB19 RAB19 atg101 atg101 uba5 uba5 pik3r4 pik3r4 ENSPMEP00000027846 ENSPMEP00000027846 ZFYVE1 ZFYVE1 vps16 vps16 LOC106916327 LOC106916327 LIX1 LIX1 tbc1d5 tbc1d5 LOC106907352 LOC106907352 uvrag uvrag spns1 spns1 rubcnl rubcnl map1lc3b map1lc3b LOC106905785 LOC106905785 LOC106911433 LOC106911433 nsfl1c nsfl1c rab7a rab7a atg2a atg2a ufl1 ufl1 tex264 tex264 LOC106906139 LOC106906139 gabarap gabarap ubxn2a ubxn2a ENSPMEP00000020991 ENSPMEP00000020991 vti1b vti1b ENSPMEP00000020510 ENSPMEP00000020510 wdr45 wdr45 nod1 nod1 LOC106911598 LOC106911598 stx17 stx17 LOC106909160 LOC106909160 ufm1 ufm1 atg13 atg13 ILRUN ILRUN spg11 spg11 ENSPMEP00000019019 ENSPMEP00000019019 pink1 pink1 LOC106929788 LOC106929788 becn1 becn1 LOC106923206 LOC106923206 LOC106917326 LOC106917326 nod2 nod2 snap29 snap29 vti1a vti1a atg14 atg14 LOC106910049 LOC106910049 sting1 sting1 LOC106914085 LOC106914085 vps41 vps41 vps39 vps39 prkn prkn emc6 emc6 LOC106911936 LOC106911936 plekhm1 plekhm1 LOC106921412 LOC106921412 SNX14 SNX14 wdr45b wdr45b LOC106905796 LOC106905796 ENSPMEP00000011268 ENSPMEP00000011268 wipi2 wipi2 ulk3 ulk3 ENSPMEP00000009222 ENSPMEP00000009222 map1lc3c map1lc3c LOC106914181 LOC106914181 retreg3 retreg3 epm2a epm2a snx30 snx30 LOC106918242 LOC106918242 stbd1 stbd1 LOC106932070 LOC106932070 LOC106905866 LOC106905866 UFC1 UFC1 ulk1 ulk1 ambra1 ambra1 vcp vcp ubxn6 ubxn6 ENSPMEP00000006188 ENSPMEP00000006188 atg4b atg4b plaa plaa retreg2 retreg2 tp53inp2 tp53inp2 ENSPMEP00000005756 ENSPMEP00000005756 LOC106908129 LOC106908129 bag3 bag3 atp13a2 atp13a2 LOC106909749 LOC106909749 pik3c3 pik3c3 cln3 cln3 atg16l1 atg16l1 GABARAPL2 GABARAPL2 ei24 ei24 WIPI1 WIPI1 TEX264 TEX264 taz taz LOC106929003 LOC106929003 ATG2B ATG2B yod1 yod1 rab1a rab1a rb1cc1 rb1cc1 SNX7 SNX7 atg3 atg3 DDRGK1 DDRGK1 tmem41b tmem41b snapin snapin LOC106924445 LOC106924445 gabarapl2 gabarapl2 trappc8 trappc8 ogt ogt zfyve26 zfyve26
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC106922052Zgc:136908; Belongs to the AAA ATPase family. (810 aa)
LOC106915273Si:dkey-46a10.3. (276 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
lamp2Lysosomal-associated membrane protein 2. (420 aa)
svipSi:ch73-147o17.1. (99 aa)
LOC106911658RAB33B, member RAS oncogene family a. (242 aa)
atg16l2WD_REPEATS_REGION domain-containing protein. (581 aa)
calcoco2SKICH domain-containing protein. (597 aa)
LOC106903400V-SNARE coiled-coil homology domain-containing protein. (121 aa)
LOC106903399Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
vps33aVPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (600 aa)
pjvkPejvakin. (356 aa)
ENSPMEP00000032997Microtubule-associated protein 1 light chain 3 alpha. (165 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
wdr81WD repeat domain 81. (2058 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (581 aa)
rab23RAB23, member RAS oncogene family. (235 aa)
LOC106905664Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (162 aa)
LOC106909381ADP-ribosylation factor-like 8A; Belongs to the small GTPase superfamily. Arf family. (187 aa)
LOC106910166Unc-51 like autophagy activating kinase 2. (567 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (874 aa)
tecpr1Tectonin beta-propeller repeat containing 1a. (1199 aa)
atg10ATG10 autophagy related 10 homolog (S. cerevisiae). (229 aa)
pacs2Phosphofurin acidic cluster sorting protein 2. (891 aa)
tp53inp1Tumor protein p53 inducible nuclear protein 1. (295 aa)
RAB19RAB19, member RAS oncogene family. (235 aa)
atg101Autophagy related 101. (215 aa)
uba5Ubiquitin-like modifier activating enzyme 5. (400 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (1325 aa)
ENSPMEP00000027846Uncharacterized protein. (102 aa)
ZFYVE1Uncharacterized protein. (783 aa)
vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (834 aa)
LOC106916327ADP-ribosylation factor-like 8Ba; Belongs to the small GTPase superfamily. Arf family. (186 aa)
LIX1Limb and CNS expressed 1. (236 aa)
tbc1d5TBC1 domain family, member 5. (874 aa)
LOC106907352ATG7 autophagy related 7 homolog (S. cerevisiae). (683 aa)
uvragUV radiation resistance associated gene. (684 aa)
spns1Spinster homolog 1 (Drosophila). (526 aa)
rubcnlRubicon like autophagy enhancer. (341 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (134 aa)
LOC106905785Uncharacterized protein. (223 aa)
LOC106911433Uncharacterized protein. (215 aa)
nsfl1cNSFL1 (p97) cofactor (p47). (388 aa)
rab7aRAB7a, member RAS oncogene family. (207 aa)
atg2aAutophagy related 2A. (2012 aa)
ufl1UFM1-specific ligase 1. (749 aa)
tex264Testis expressed 264, ER-phagy receptor a. (343 aa)
LOC106906139Sorting nexin 14. (920 aa)
gabarapGABA(A) receptor-associated protein b. (122 aa)
ubxn2aUBX domain protein 2A. (235 aa)
ENSPMEP00000020991Uncharacterized protein. (413 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (227 aa)
ENSPMEP00000020510Uncharacterized protein. (347 aa)
wdr45WD repeat domain 45. (358 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (941 aa)
LOC106911598Uncharacterized protein. (1075 aa)
stx17Syntaxin 17; Belongs to the syntaxin family. (298 aa)
LOC106909160Tectonin beta-propeller repeat-containing protein 1-like. (1122 aa)
ufm1Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes. (94 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (532 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (320 aa)
spg11SPG11 vesicle trafficking associated, spatacsin. (2395 aa)
ENSPMEP00000019019NBR1 autophagy cargo receptor a. (618 aa)
pink1PTEN induced kinase 1. (575 aa)
LOC106929788Uncharacterized protein. (207 aa)
becn1Beclin 1, autophagy related. (448 aa)
LOC106923206Zinc finger, FYVE domain containing 1. (776 aa)
LOC106917326Zgc:171927. (220 aa)
nod2Nucleotide-binding oligomerization domain containing 2. (996 aa)
snap29Synaptosome associated protein 29. (258 aa)
vti1aVesicle transport through interaction with t-SNAREs 1A. (154 aa)
atg14Autophagy related 14. (378 aa)
LOC106910049Histone deacetylase 10. (673 aa)
sting1Transmembrane protein 173. (395 aa)
LOC106914085Tectonin beta-propeller repeat containing 1b. (1122 aa)
vps41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (854 aa)
vps39VPS39 subunit of HOPS complex. (876 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (443 aa)
emc6ER membrane protein complex subunit 6. (110 aa)
LOC106911936Uncharacterized protein. (480 aa)
plekhm1Pleckstrin homology domain containing, family M (with RUN domain) member 1. (1083 aa)
LOC106921412Prohibitin. (303 aa)
SNX14Sorting nexin 14. (931 aa)
wdr45bWD repeat domain 45B. (344 aa)
LOC106905796WD repeat domain, phosphoinositide interacting 1. (444 aa)
ENSPMEP00000011268Uncharacterized protein. (920 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (437 aa)
ulk3Unc-51 like kinase 3; Belongs to the protein kinase superfamily. (469 aa)
ENSPMEP00000009222Uncharacterized protein. (627 aa)
map1lc3cMicrotubule-associated protein 1 light chain 3 gamma. (177 aa)
LOC106914181Si:ch211-11n16.2. (655 aa)
retreg3Reticulophagy regulator family member 3. (496 aa)
epm2aEPM2A glucan phosphatase, laforin. (316 aa)
snx30Sorting nexin family member 30. (443 aa)
LOC106918242Inflammation and lipid regulator with UBA-like and NBR1-like domains. (283 aa)
stbd1CBM20 domain-containing protein. (880 aa)
LOC106932070Unc-51 like autophagy activating kinase 1a. (921 aa)
LOC106905866Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (608 aa)
UFC1Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. (176 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1023 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1201 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (806 aa)
ubxn6UBX domain protein 6. (438 aa)
ENSPMEP00000006188Uncharacterized protein. (330 aa)
atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (424 aa)
plaaPhospholipase A2-activating protein. (799 aa)
retreg2Reticulophagy regulator family member 2. (562 aa)
tp53inp2Uncharacterized protein. (287 aa)
ENSPMEP00000005756Reticulophagy regulator 1. (354 aa)
LOC106908129Prohibitin. (306 aa)
bag3BCL2 associated athanogene 3. (515 aa)
atp13a2Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1166 aa)
LOC106909749Hist_deacetyl domain-containing protein. (675 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (876 aa)
cln3Battenin. (444 aa)
atg16l1ATG16 autophagy related 16-like 1 (S. cerevisiae). (605 aa)
GABARAPL2GABA type A receptor associated protein like 2. (105 aa)
ei24EI24 autophagy associated transmembrane protein. (341 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (444 aa)
TEX264Testis expressed 264, ER-phagy receptor. (306 aa)
tazTafazzin family protein; Belongs to the taffazin family. (262 aa)
LOC106929003Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (186 aa)
ATG2BAutophagy related 2B. (2001 aa)
yod1YOD1 deubiquitinase. (300 aa)
rab1aUncharacterized protein. (203 aa)
rb1cc1RB1-inducible coiled-coil 1. (1616 aa)
SNX7Sorting nexin 7. (358 aa)
atg3Autophagy-related protein 3. (315 aa)
DDRGK1DDRGK domain containing 1. (293 aa)
tmem41bTransmembrane protein 41B. (284 aa)
snapinSNAP associated protein. (134 aa)
LOC106924445ZRAB1B, member RAS oncogene family a. (205 aa)
gabarapl2GABA(A) receptor-associated protein like 2. (116 aa)
trappc8Trafficking protein particle complex 8. (1454 aa)
ogtO-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1049 aa)
zfyve26Zinc finger, FYVE domain containing 26. (2501 aa)
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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